G1691100


Basic Information

Item Value
gene id G1691100
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 37472360 ~ 37477201 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1934232
ctttataccacacgCTCCCtctttataccacacactgtataccacacactttataccacaagCTCCTGCTTTTTACCAcacgctttataccacacactcctgctttataccacacgctttataccacacactcctgctttataccacacgctcctgctttataccacacgctcctgctttataccacacactgtataccacacactttataccacaagctcctgctttataccacacactgtataccacacactttataccacaagctcctgctttataccacacaCTCCCtctttataccacacactgtataccacacactttataccacaagctcctgctttataccacacactcctgctttataccacacactgtataccacacactttataccacac
>TU1934234
ctttataccacacgCTCCCtctttataccacacactgtataccacacactttataccacaagCTCCTGCTTTTTACCAcacgctttataccacacactcctgctttataccacacgctttataccacacactcctgctttataccacacgctcctgctttataccacacgctcctgctttataccacacactgtataccacacactttataccacaagctcctgctttataccacacactgtataccacacactttataccacacgCTCCCtctttataccacacactgtataccacacactttataccacaagCTCCTGCTTTTTACCAcacgctttataccacacactcctgctttataccacacgctttataccacacactcctgctttataccacacgctcctgctttataccacacgctcctgctttataccacacactgtataccacacactttataccaca

Function

NR:

description
uncharacterized protein LOC110016724

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1934232 False 401 lncRNA 0.43 2 37472360 37476067
TU1934234 True 468 lncRNA 0.44 2 37472360 37477201

Neighbor

gene id symbol gene type direction distance location
LOC110499442 LOC106589867 coding upstream 486800 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 553709 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 556173 36914324 ~ 36916187 (+)
LOC118942068 NA coding upstream 562790 36906650 ~ 36909570 (+)
LOC118942468 NA coding upstream 568415 36903830 ~ 36903945 (+)
LOC110499446 LOC106589902 coding downstream 598772 38075973 ~ 38081270 (+)
LOC110499447 LOC106589900 coding downstream 606694 38083895 ~ 38203970 (+)
LOC110499600 NA coding downstream 1103534 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 1117618 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 1162394 38639595 ~ 38640649 (+)
G1691033 NA non-coding upstream 185236 37286894 ~ 37287124 (+)
G1691029 NA non-coding upstream 189621 37282505 ~ 37282739 (+)
G1691028 NA non-coding upstream 192118 37280041 ~ 37280242 (+)
G1691027 NA non-coding upstream 192359 37279798 ~ 37280001 (+)
G1691016 NA non-coding upstream 232954 37239092 ~ 37239406 (+)
G1691124 NA non-coding downstream 39606 37516807 ~ 37517063 (+)
G1691133 NA non-coding downstream 55145 37532346 ~ 37532553 (+)
G1691134 NA non-coding downstream 55724 37532925 ~ 37533144 (+)
G1691141 NA non-coding downstream 63620 37540821 ~ 37541156 (+)
G1691143 NA non-coding downstream 66350 37543551 ~ 37543761 (+)
G1690753 NA other upstream 591622 36878051 ~ 36880738 (+)
G1690116 NA other upstream 1159662 36304939 ~ 36312698 (+)
G1690099 NA other upstream 1196417 36275482 ~ 36275943 (+)
G1690092 NA other upstream 1207379 36264660 ~ 36264981 (+)
G1689732 LOC106612293 other upstream 1346970 36120616 ~ 36125390 (+)
G1691142 NA other downstream 64719 37541920 ~ 37543265 (+)
G1691189 NA other downstream 173425 37650626 ~ 37654064 (+)
G1691267 NA other downstream 327342 37804543 ~ 37809061 (+)
G1691990 aatk other downstream 745304 38222505 ~ 38222735 (+)
G1691992 NA other downstream 750814 38228015 ~ 38228551 (+)

Expression


Co-expression Network