G1691990 (aatk)


Basic Information

Item Value
gene id G1691990
gene name aatk
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38222505 ~ 38222735 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935199
CTGGACCAGAGTCCACATCAGAGTCAGAGACGTGTGTGATGGAGAAGCGAGACACGTGGCTTGGGGAGACTGTGAAGCGGGAGTACCGCACTGCTGGTTTGGGCTCCGGGGCCTTAGAGGTGAAGGACAGCCTGGGTACGGAGGGGGATGAGCCTGAGGAGGAGGCAGCCATCTTGGATGAGGAAGTTGGAATGGGCAAAAGGGGGAAGTCATCCTCCCACTCATACCctg

Function

symbol description
aatk Predicted to enable protein tyrosine kinase activity. Predicted to be involved in brain development and peptidyl-tyrosine autophosphorylation. Predicted to act upstream of or within several processes, including Rab protein signal transduction; negative regulation of axon extension; and protein autophosphorylation. Predicted to be located in axonal growth cone; endoplasmic reticulum; and recycling endosome.

NR:

description
serine/threonine-protein kinase LMTK1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935199 True 231 TUCP 0.59 1 38222505 38222735

Neighbor

gene id symbol gene type direction distance location
LOC110499447 LOC106589900 coding upstream 18535 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 141235 38075973 ~ 38081270 (+)
LOC110499442 LOC106589867 coding upstream 1236945 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 1303854 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 1306318 36914324 ~ 36916187 (+)
LOC110499600 NA coding downstream 358000 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 372084 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 416860 38639595 ~ 38640649 (+)
LOC110499463 LOC106589886 coding downstream 834301 39057036 ~ 39068138 (+)
plaub plau coding downstream 888155 39110890 ~ 39118850 (+)
G1691989 NA non-coding upstream 3895 38216891 ~ 38218610 (+)
G1691969 NA non-coding upstream 46691 38175570 ~ 38175814 (+)
G1691963 NA non-coding upstream 66709 38155087 ~ 38155796 (+)
G1691954 NA non-coding upstream 80390 38141859 ~ 38142115 (+)
G1691908 NA non-coding upstream 147847 38074384 ~ 38074658 (+)
G1691915 LOC106589899 non-coding downstream 7091 38229826 ~ 38230188 (+)
G1692003 NA non-coding downstream 20577 38243312 ~ 38244355 (+)
G1692028 NA non-coding downstream 100306 38323041 ~ 38323340 (+)
G1692029 NA non-coding downstream 102188 38324923 ~ 38325185 (+)
G1692174 NA non-coding downstream 106802 38329537 ~ 38329877 (+)
G1691267 NA other upstream 413444 37804543 ~ 37809061 (+)
G1691189 NA other upstream 568441 37650626 ~ 37654064 (+)
G1691142 NA other upstream 679240 37541920 ~ 37543265 (+)
G1690753 NA other upstream 1341767 36878051 ~ 36880738 (+)
G1690116 NA other upstream 1909807 36304939 ~ 36312698 (+)
G1691992 NA other downstream 5280 38228015 ~ 38228551 (+)
G1692406 NA other downstream 345534 38568269 ~ 38569446 (+)
G1692568 NA other downstream 488216 38710951 ~ 38712291 (+)
G1692702 NA other downstream 617199 38839934 ~ 38840271 (+)
G1693184 NA other downstream 1133610 39356345 ~ 39359635 (+)

Expression


Co-expression Network