G1691915 (LOC106589899)


Basic Information

Item Value
gene id G1691915
gene name LOC106589899
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38229826 ~ 38230188 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935119
GTGACGTCATCAAAAAAGGACACCACTTTCTTCTTGCGTTCCACCAGGTCATCGGCGAGCAACTCGGTGGTGAGCGGGGTGGGCATCTTCAGTAGACTACGTAGGTTATGAGCATCGCTACAGTCGCTCAACACAACGGGTACAGCATGGTTCTCCTCcccgctctcctcccctccactctgcTCCTCCTGAACACTGTAACTGCTCAGCTCCTCGTCTGACTCACTGTCATCGGAGTCACCATCTACGTCCTCCTTGTCCGCCTCCACCCCGTCCATGGGCAACTCCCAGCCCAGAGGGGGAGTCAtcgtggggagaggaggagaaggggtggagggagggagaggagaggagagaggaggg

Function

NR:

description
serine/threonine-protein kinase LMTK1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935119 True 363 lncRNA 0.59 1 38229826 38230188

Neighbor

gene id symbol gene type direction distance location
LOC110499447 LOC106589900 coding upstream 25856 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 148556 38075973 ~ 38081270 (+)
LOC110499442 LOC106589867 coding upstream 1244266 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 1311175 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 1313639 36914324 ~ 36916187 (+)
LOC110499600 NA coding downstream 350547 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 364631 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 409407 38639595 ~ 38640649 (+)
LOC110499463 LOC106589886 coding downstream 826848 39057036 ~ 39068138 (+)
plaub plau coding downstream 880702 39110890 ~ 39118850 (+)
G1691989 NA non-coding upstream 11216 38216891 ~ 38218610 (+)
G1691969 NA non-coding upstream 54012 38175570 ~ 38175814 (+)
G1691963 NA non-coding upstream 74030 38155087 ~ 38155796 (+)
G1691954 NA non-coding upstream 87711 38141859 ~ 38142115 (+)
G1691908 NA non-coding upstream 155168 38074384 ~ 38074658 (+)
G1692003 NA non-coding downstream 13124 38243312 ~ 38244355 (+)
G1692028 NA non-coding downstream 92853 38323041 ~ 38323340 (+)
G1692029 NA non-coding downstream 94735 38324923 ~ 38325185 (+)
G1692174 NA non-coding downstream 99349 38329537 ~ 38329877 (+)
G1692177 NA non-coding downstream 105519 38335707 ~ 38336051 (+)
G1691992 NA other upstream 1275 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 7091 38222505 ~ 38222735 (+)
G1691267 NA other upstream 420765 37804543 ~ 37809061 (+)
G1691189 NA other upstream 575762 37650626 ~ 37654064 (+)
G1691142 NA other upstream 686561 37541920 ~ 37543265 (+)
G1692406 NA other downstream 338081 38568269 ~ 38569446 (+)
G1692568 NA other downstream 480763 38710951 ~ 38712291 (+)
G1692702 NA other downstream 609746 38839934 ~ 38840271 (+)
G1693184 NA other downstream 1126157 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1651161 39881349 ~ 39881843 (+)

Expression


Co-expression Network