G1692177


Basic Information

Item Value
gene id G1692177
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38335707 ~ 38336051 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935409
caaagtaaactgcctgttactcaggcccagaagataggatatgcataaaACACATAATGTCTGGGAGTATAACAGGCATGTAATGGCAgacaaaacccagaggacaaaccatgcaacaaaacaaaaattcagcctaccactgtttccaATGGCTGTCATGTTCATTATGAGGCGAAATCCTCCaggattgcagttcctagggcttccactagatgtcaacagtctttagaaagagtttcaggcttgtttttggaaaaattagctagaatttgtagtttctctaagtggctcccatttagGCTGTAGTGTTTTCATGCGCATGGATGAGAGTGTGCTCTTTGTTGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935409 True 345 lncRNA 0.41 1 38335707 38336051

Neighbor

gene id symbol gene type direction distance location
LOC110499447 LOC106589900 coding upstream 131737 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 254437 38075973 ~ 38081270 (+)
LOC110499442 LOC106589867 coding upstream 1350147 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 1417056 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 1419520 36914324 ~ 36916187 (+)
LOC110499600 NA coding downstream 244684 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 258768 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 303544 38639595 ~ 38640649 (+)
LOC110499463 LOC106589886 coding downstream 720985 39057036 ~ 39068138 (+)
plaub plau coding downstream 774839 39110890 ~ 39118850 (+)
G1692174 NA non-coding upstream 5830 38329537 ~ 38329877 (+)
G1692029 NA non-coding upstream 10522 38324923 ~ 38325185 (+)
G1692028 NA non-coding upstream 12367 38323041 ~ 38323340 (+)
G1692003 NA non-coding upstream 91352 38243312 ~ 38244355 (+)
G1691915 LOC106589899 non-coding upstream 105519 38229826 ~ 38230188 (+)
G1692180 NA non-coding downstream 5317 38341368 ~ 38341944 (+)
G1692194 NA non-coding downstream 47210 38383261 ~ 38383513 (+)
G1692203 LOC106589897 non-coding downstream 66559 38402610 ~ 38412975 (+)
G1692214 NA non-coding downstream 91362 38427413 ~ 38427739 (+)
G1692221 NA non-coding downstream 100649 38436700 ~ 38464452 (+)
G1691992 NA other upstream 107156 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 112972 38222505 ~ 38222735 (+)
G1691267 NA other upstream 526646 37804543 ~ 37809061 (+)
G1691189 NA other upstream 681643 37650626 ~ 37654064 (+)
G1691142 NA other upstream 792442 37541920 ~ 37543265 (+)
G1692406 NA other downstream 232218 38568269 ~ 38569446 (+)
G1692568 NA other downstream 374900 38710951 ~ 38712291 (+)
G1692702 NA other downstream 503883 38839934 ~ 38840271 (+)
G1693184 NA other downstream 1020294 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1545298 39881349 ~ 39881843 (+)

Expression


Co-expression Network