G1692180


Basic Information

Item Value
gene id G1692180
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38341368 ~ 38341944 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935415
gtcaaaatgctgtggtagccatgctggttaagtgtgaccttgataaataaatcacagtgtcaccagcaaatcacccccacaccatcacacctccttcacggtgggaaccacacatgcggagaacaTCCGTTTCATCACAGAGCTTgaaggtttttgcgactgcacttgtagaaactttcaaagttcttgacattttccggattgactggccttcatgtcttaaagtaatggactgtcgtttccccTTTGCTGATGAGCTGTTCCTGTCATAATATGGAATTTTacccaatagggctatcttctctataccacccctaccttgtcacaacacaactgattggttcaaacaaattaagaaagaaattccacatattaAATTttaaaggcacacctgttaattgaaatgcattccaggtaactacctcaagctggttgagagaatgccaagagtatgcaaagctgtcatcaaggcaaagagtagctactttgaagaatctcaaatataaaatatatttttatttctttcacacCGCTTTGGTGACTACATTATtacatatgtgttacttcatagttctGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935415 True 577 lncRNA 0.40 1 38341368 38341944

Neighbor

gene id symbol gene type direction distance location
LOC110499447 LOC106589900 coding upstream 137398 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 260098 38075973 ~ 38081270 (+)
LOC110499442 LOC106589867 coding upstream 1355808 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 1422717 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 1425181 36914324 ~ 36916187 (+)
LOC110499600 NA coding downstream 238791 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 252875 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 297651 38639595 ~ 38640649 (+)
LOC110499463 LOC106589886 coding downstream 715092 39057036 ~ 39068138 (+)
plaub plau coding downstream 768946 39110890 ~ 39118850 (+)
G1692177 NA non-coding upstream 5317 38335707 ~ 38336051 (+)
G1692174 NA non-coding upstream 11491 38329537 ~ 38329877 (+)
G1692029 NA non-coding upstream 16183 38324923 ~ 38325185 (+)
G1692028 NA non-coding upstream 18028 38323041 ~ 38323340 (+)
G1692003 NA non-coding upstream 97013 38243312 ~ 38244355 (+)
G1692194 NA non-coding downstream 41317 38383261 ~ 38383513 (+)
G1692203 LOC106589897 non-coding downstream 60666 38402610 ~ 38412975 (+)
G1692214 NA non-coding downstream 85469 38427413 ~ 38427739 (+)
G1692221 NA non-coding downstream 94756 38436700 ~ 38464452 (+)
G1692225 NA non-coding downstream 103772 38445716 ~ 38447781 (+)
G1691992 NA other upstream 112817 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 118633 38222505 ~ 38222735 (+)
G1691267 NA other upstream 532307 37804543 ~ 37809061 (+)
G1691189 NA other upstream 687304 37650626 ~ 37654064 (+)
G1691142 NA other upstream 798103 37541920 ~ 37543265 (+)
G1692406 NA other downstream 226325 38568269 ~ 38569446 (+)
G1692568 NA other downstream 369007 38710951 ~ 38712291 (+)
G1692702 NA other downstream 497990 38839934 ~ 38840271 (+)
G1693184 NA other downstream 1014401 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1539405 39881349 ~ 39881843 (+)

Expression


Co-expression Network