G1692203 (LOC106589897)


Basic Information

Item Value
gene id G1692203
gene name LOC106589897
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38402610 ~ 38412975 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935441
atatatatatatatattacacacacttatatatacacacacttatAAACTACTTAATAGTGGCTAATATGTAAAGCTTGTAGCACACTCTATATGTGTTCACAACATTTTAATGAATAAACCCACTCTATATGTGTTCACAACATTTTAATGAATAAACCCACTCTATATGTGTTCACAACATTTTAATGAATAAACCCACTCTATATGTGTTCACAACATTTTAATGAATAAACCCACTCTATATGTGTTCACAACATTTTAATGAATAAACCCACTCTATATGTGTTCACAACATTTTAATGAATAAACCTCAACCAAAGTTTCACAATGCGGTGCCTTCTTTAGAAAAGGTTAAAATGTGTATTTAAAGCATAGTGTTAACCATGCTTTTAATTGATAGGAAAGATAGAAGACGAGACAAGAAAGACAGGAGACGTTTTACAcggcagtcatttagcagacgctcttatccagtggCACTAAACCACAAGACCACTGCAGGCCGCTCCATAAAGACATTTGATTTTTCATTCTTATACAACTTTCATAGCAAAAGGATTTGTCATTTCTCAAATATTAAAAGGGCAATCTGGGAATGGTACACCCATTTTCTAATTTATAAATTAGACACACTCcagctaaaaaaaaaataataaattttCAAAAATGATTGTTGAAACAATATCTATCCCAATTAATGTACACCCACTTAAGGGTATAACATATATGTTTTGTGCAAATTAGTGGTTAGACGACCAATAGAGAACAGAAGGGGAAAAGCCCCTCCCACTTGTGCCATGTCATGACTTACTTGAACTTGAGATGTGCCTTTTTGTTAAATAAATAACGTGATAAAGGAGATGAAAATGAGACTAAAGTGCCTCTTTAATGATATATAGCCATTCATTCTTGAAGAATGTAACTTAAAATGTCTCATGAGCTGTCCTACTTCACCACAagccaaaatataagcttgttttaatatattttttataaacaatgtaattgtaaaaaaaaaaaacattgtaaagCTTACAAAACATGGTTAAAGCTATCAGACAGTCATTGTTTCCAAACCGCTGTCTATGAATTTAAGAGATACATTTCTTTAGCCTCTATCCCTAAGCTTTTTACAAAACAATGTCAGGGTCACTGTTTGTTTGAATCCCATATTGCCCCTTTAATAAATAAGTAAATATATTTCAGGTTATCCATCTTCACAAATAAATCAAGACAACAGTAAGGCCCATTGAAAACAACACTCACTCAGCAAGATGTGCCCAGGGAAAAGTGAACACACAATATACTAGATAGGATGTGCAGCAATAGGCTATCTCCTTCCCAACTCTCGTTCTTCCAGAGCACGCCAGCCATTACTTTAAAAGATACATCTCCCGAACGAATAGCACTTGCACTCAGACTGCCAATTCAACCTTGCCCTTGACTGCATCACGGAAAGAGTTTAAATGGTAAGAAACATCAGAATGAACAAGGTGCTCAGCAAATAAAGGGAGCTGAACAAACTGTGTCCATGATCAAAAATGGATtcgtaggggtaggggtaggggtaagGGTAGGGGTAAGGGTAGGGGTAAGGGTGGGTGTAAGGGTAGGGGTTGGGGTCGACAGTAGTTGTTGGGCCATCAGAACATATGTAATCGCTGTCAGCATCTACCCCACTGGAGGTAAATTGGACAAAGCCTGGCTTGTCGGTCCTGATATGGCCGTCGATCCAGGACTGGTAACGGGACACTCTGGTGTAGATCCCAGGGAGATTGGGCCGAGCGCAGCCTTGACCCCAACTAACAACCCCAGACTGGACCCAGACAGAGTTCTGTTGGATCACCATTGGACCTCCTGAGTCACCCTGAGAAGATGGAGCAAGGTCATTAAAAGAAGGATCTAGGAAATGAAATGGAACGGGGCCCAGTTTTTCAAAACTTATCAGATCAGATTTCTGCAATCTGATCGGATTAAAAAGCATAGAAATGTAATGAGTAGAACAGAGGTATCATTGACCTGAATGGGGAcgcccgttctattcattctatttctatgcatttaatcctGTCCGCTTGCCAAAATCCGAATCGATAACTTTTGAAAAACTGGGCACTGTCGTAGAACAAGATGAGTTAGTGTGAACTTTACCTGACATGAGTCCTTGCCCCCTGCCAGATCACCAGCACAGAGCATGTTGTCTGTGATTGAGCCTGCCCCATTGAGGCAGTCACACTGTCTGTTCCCCACAACTGAAACCTCCACTTCTTGCAGATCCTGGGGGGATGGGAGGGGAACTGAAGGAAATAAAGGAAGACAAGTGATGGGAGATTAAAAATGGGAGGTAACAACTTTATGACAGTTTTCATCAGGTTGTCAATTTCCATCAGAATAAGAAGAAATTCATGTGCACCTGCATTGTGACCACTGGGGGGCACTGTTTCACATAAAACATCATCTCATCAACATCTCCTACAATGGATCATGAATGTGTCCTCACCTCCTTCATTGACGTTGCCCCAGCCGGTCACCCAGCTATCAGTACCATTGTTGAAAACACTATCACTTGCTGCCAGACAGACGGGTCGGATGTAGTTTGTGAAGTTGACTGGTGAGGAGAGTCTGAGCAGAGCGATGTCGTTGTCCTTTGTTAAATCGTTGTAATCTGGATGTATAATGATCTCAGCCACAGTTCTGGACACTTCGTTGGGGTTAATCCCCTCCAGGGTCTGTAGACCAAGGCTAACGTTCCAACCATTTGGGTCTGAGCTTTGTTGGAAcgaaaaatgtaattaaattaaGATGGATCAAAGTGATGAAATATAAGATTAACATGGAATTAATAGACAGTTACATTTTGGAAAAGTAATTTCAAGAGTTGCGCTCAGCTGCATCACAAATAACTGacataattatttattttgtaaAACAACTTTTATGTCCCCTTGTATCTCACGCTAACTCACCTAGAGAAGCAGTGGGCTGCAGACATCACCCACGCCTTGTTGACGAGGGACCCACCGCAAACATGTCCGTCAGAAGTTTGGAGACTTGCCTGCCAGGGCCAACTTCCTGCAGGGGCATTTTCTCCTCCCACTATTTTGTTGTTGAGTGGAGGGGTGCCACACACAGTGGCTGATGAAGAGCCAACCGTTGAAGTGATGTCTGCAATAGTAGTAGTTGCAGGAAGAGCAGTGGACACCATACCCATCATCAACAGAAGCAACACGGAAAGCGTCCTTTGACTCCCCATTGTCAGAAGCTCCTTTTCTGCTCAAATCTGTTTCTGTGCATTCACCCTTTCTTCTGTGTAGTTCTGTTGGGCTGGCGCTATACTCTTATATACTGTAGACAATGGGGGCATTGACAATGACATCAATGAATAATCTCAAGGACATCTACTGTCGTTGTGACAAGTCCACTCACACGAATAGCTAACCTGTTTCTCTGGTTCTTTCCTTTATCCAGTCAGCTGGAATTAGGCATACagtaagtctctgaatgttctggTAGCAAATACCTACCAAACCGGTTTGAATACATTTGCCACTGTTGATGGGCCATCGGCAGGGCAATTAGGTACACtctttagaaaaaagggttcaaaAATGGTTcttcgactgtccccataggagaacactaTTTGGGGTCTAGGtacaaccctttttggttccagatagaaccattTTTTAGTTACATGTAGAGTGCTCTgcagaaagggttctacatggaacccaaaagggttcttcaaagagatctcccatggggacagccgaagaacacgtttagattctagatagcacctttttttccctGAAGAGTGTATGCTAAGTTAAGGGTCTGTGAGAGGGTTTTGTACATGCAGTAATGTAATGCATTTTTTAAATGCAGAATAGTGTAGATTAATTGGAAGAACAAACC

Function

NR:

description
tryptase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935441 True 3923 lncRNA 0.41 6 38402610 38412975

Neighbor

gene id symbol gene type direction distance location
LOC110499447 LOC106589900 coding upstream 198640 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 321340 38075973 ~ 38081270 (+)
LOC110499442 LOC106589867 coding upstream 1417050 36965177 ~ 36985560 (+)
LOC118942467 NA coding upstream 1483959 36918536 ~ 36918651 (+)
LOC110499440 NA coding upstream 1486423 36914324 ~ 36916187 (+)
LOC110499600 NA coding downstream 167760 38580735 ~ 38594305 (+)
LOC110499544 mkk6c coding downstream 181844 38594819 ~ 38638772 (+)
LOC118942016 NA coding downstream 226620 38639595 ~ 38640649 (+)
LOC110499463 LOC106589886 coding downstream 644061 39057036 ~ 39068138 (+)
plaub plau coding downstream 697915 39110890 ~ 39118850 (+)
G1692194 NA non-coding upstream 19097 38383261 ~ 38383513 (+)
G1692180 NA non-coding upstream 60666 38341368 ~ 38341944 (+)
G1692177 NA non-coding upstream 66559 38335707 ~ 38336051 (+)
G1692174 NA non-coding upstream 72733 38329537 ~ 38329877 (+)
G1692029 NA non-coding upstream 77425 38324923 ~ 38325185 (+)
G1692214 NA non-coding downstream 14438 38427413 ~ 38427739 (+)
G1692221 NA non-coding downstream 23725 38436700 ~ 38464452 (+)
G1692225 NA non-coding downstream 32741 38445716 ~ 38447781 (+)
G1692252 NA non-coding downstream 69999 38482974 ~ 38485511 (+)
G1692255 NA non-coding downstream 72673 38485648 ~ 38486386 (+)
G1691992 NA other upstream 174059 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 179875 38222505 ~ 38222735 (+)
G1691267 NA other upstream 593549 37804543 ~ 37809061 (+)
G1691189 NA other upstream 748546 37650626 ~ 37654064 (+)
G1691142 NA other upstream 859345 37541920 ~ 37543265 (+)
G1692406 NA other downstream 155294 38568269 ~ 38569446 (+)
G1692568 NA other downstream 297976 38710951 ~ 38712291 (+)
G1692702 NA other downstream 426959 38839934 ~ 38840271 (+)
G1693184 NA other downstream 943370 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1468374 39881349 ~ 39881843 (+)

Expression


Co-expression Network