G1692288 (cnrg)


Basic Information

Item Value
gene id G1692288
gene name cnrg
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38478761 ~ 38485362 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935557
CCTGGCCCTCAGAGCCAACCTAGCATAGAGACCCACACATCTGCTAGAGAGAGCTGCGCTCAGCGCCCACGCCCACTCTTCTGGCTAGCCTTCACCCAAGCAGCAGAAGAGGACTTCAGAGAGGGATTGAACACATAAGCAGCTGCACACATCAACCAGCTAACTAATAACCATGAATCTCGAGGTCCCCAAGTTGGAGATCAAGTCTGCCACCCGTGTCACTGGAGGCCCTGCAACACCACGTAAGGGACCCCCTAAATTCAAGCAGAGGCAGACTCGCCAGTTCAAGAGCAAGCCCCCCAAGAAGGGAATTCAGGGCTTTGGCGATGACATCCCTGGAATGGAGGGCTTAGGCACTGACATCACAGTAATCTGCCCCTGGGAGGCCTTCAACCACCTGGAGCTTAGTGAACTGGCCAAATATGGTATCATCTAAGTCATCCAGACCTTCACCATCCATCCCGCAGTCCTCTGCATCCACCTCCGTCTACTTCAAGCCATGCATGTGCCTCGAGCACTCTCACTGGGTTTGACTAGAACTTTTCAAACATAAACCAAAgaataaagaaataaagaaaacgTTACAGAAAAACAACTGTCTACACtcttatctagaacctaaaagggttctactGCTGTTTCCGTTGTAGAACCCTTTGTAGACCCCTTTTTTGCTACTAGGTAAAAAcccttttagttccaggtagaacccttttgggtttcatgtagaaccctttccatagagtattctacatggaacccaaaagggttctatttctgcctggaaccaaaaaggattctacctggaaccaaaaaagtttATTCTATGAGGAAGGCCGAAGAATCATTTTGGAaccatttttttctaagagtgtatcgaTCTTTCACTGCTTTCTTGTTTTGTTTCTGCAGCCAACGTTCACATCATACAAAATGTCTGCTCATGATTAGGACTCTGTTCTGGTATCGCTGTCTATTGCAGCAACCGGCAGCCATTTtgcccttctcctctccaccatctccACGCGCTTCTCTTCTTCTATCCTCTCCTTTACACGGAACACAACAAACAACACTTACGAAAGCAAAGCAGCCTCAACCTTGAGGAAACAAACAAGTGACATACTCGTGAAATGGGTGGGTTCTCATTTCATGTGCCTCGGCACCTCTGCTGTCATCATAGATGCCTGCCCTTCTATGTGGAATAAACACTTATAAAACATGACTcctgtagagagagatgagacagcTGCTGGTCATTGCTGAGCTGTAATCTGTAATCTGTCCCTGGGACAATGTGGATGAAGctacatcatcctcatcatcatcatcccacTCCCATTTTCCCCTCCCTCACCTATCCATtagtggtacacacacacacacacacacacacacacacaactttaacAGAAGCAGGATTATAACATTCCATTCTGTTTATCACTGGCATACTCTTCACTTCTCCTTCTCTTATactgattttatatatatatttttttataataaatgATTTATGACTATCTGTATTATAtatcatgtacagtaccagtgaaaattttggacacacctactcattccagggtttttcttaattttttttactattttctacatcgtagaataatagtgaagacatcaaaactattaaataacaagagtgcaaagctgtcatcaaggcaaagggttgttattttgaagaatctgaaatataaaatacattttgatttgtttaaaaacgTTTGGGATTATTTCATGATTCcaaatgtgctatttcatagttttgatgtcttcactattattatatagaaaatagttaaaaaaataacaaaaaacccataaatgagtagatgtgtccaaacttttgactggtactatatattctAACTTAGTATTCTCCGGGATAGAAGCTTGTTTAATGGCTTGGAAAAAACACCTTGTCATTGGGAATTTTGACTTTTACTGCCCTTAGTTTTACCCCAAGCAGCATGATTTACATgggacagtggaggctggtgggatgagctgtaggaggacgggctcattgtcatgcctggaatggaataaatgaaaCCGAGTCGAACATGTgctttccatatgtttgatgtggttgataccgttccattcatttacaatgagcccatcatcctatagctcctcccgccAGTCTCCACTGACACGGATTGGAGATTAATGCAACATTACTACAATGGATGTAGATGGCACTGACAGCCACTGCACAGATTACCCACAAACCTCGGATGTCAAACTCGATTCCAAATGTGATTGTCACCTGATAATCTACCATGCTGTGATTGGGCAGTAGTAGTTGGTGATGTCTCGTGTTGTTGTGCTTCTTTTTTGTAGGTTTTTCATGCTCATGTTGACGTCTCTTTGACATATTATAAAGTTGGGCGTGCGATCTCTATTTCATTCATCTCATTATTTTCCTTATCACGCTTACCatcattttgttttcttttggTTCATTGTAGTTTCATATCAATTTCAATTGTATATTTCATTGAATCATATTTCCAGAGATCAATGTACCCGTATGGCCAGTTCCATTTTAATAGCATATATCATTCATAGATGTAGGTATTATATGATTGCATGTTCTCTGTCTTATACTTTGTCCACCGCATGTTGGCGTTGTGtcctgtgtgtattgtgtttatGCTGCATGCTCGTCTTTTCATTATGTTCACTGCAGTTTGTAGTTGTGTGCTGCAGTCTGTAGTTGTGTACTCATGTAGAAGACAATCTTTCCTCTTCATTATCTCTGCATCATCTCATAATATCAATCATTCGTAGTGGGtaaaaaggccaaaaagataatcaaggacaaatcaaatgtatttataaagcccttcttacatcagctgatgtctcaaagtggtgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaaactccctagaaaggccagaacctaggaagaaacctagagaggaaccaggctatgaggggtgggccagtcctcttctgacaacaaccacccgagccactgtctgttcaccccgctatcatcgcactgcatcttagtgcaagaggcgtcactgcagtacctggttcgaatccaggctgcatcacatccggacgtgattgggagtcccacagggcggcacactattggcccagcgttgtccgggtttggccggggtaggccgtcattgtaaataagaatttattcttaactgacttttaaataaaataaaaaataaaaattatccagaaggcgaggtcagtacaggtgcatcaaagctgggacagagagactgaaaaacagcttctatctcaaggccatcagactgttaaatagtcatcactagcacattagaggcagctgccctatatacatagacttggaatcaatggccactttaataatggaacgctagtcactttattaatgtttacatattttgcattactcatctcatgtacagtggggcaaaaaagtatttagtcagccaccaattgtgcaagttctcccacttaaaaagatgagagaggcctgtaaaaaaaataataaaatccagaaaatcacattgtaggatttttaatgaatttatttgcaaattatggtggaaaataagtatttggtcaataacaaaagtttatctcaatactttgttatattccctttgtttgcaatgacagaggtcaaacgttttctgtaagtcttcacaaggttttcacacactgttgctggtattttggcccattcctccatgcagatctcctctagagcagtgatgttttggggctgttgctgggcaacacggactttcaacttcctccaaagattttctatgggggggagatctggagactggctaggccactccaggaccttgaaatgcgtcttacgaagccactccttctttgcccgggcggtgtgtttgggatcattgtcatgctgaaagacccagccacgtttccaCTTcgtgctgatggaaggaggttttcactcaaaatctcacgatacatggcccaattcattctttcctttacacggatcagtcgtcctggtccctttgcagaaaaacagccccaaagcatgatgtttccacccccatgcttcacagtaggtatggtattctttggatgcaactcagcattctttgtcctccaaacacaattggtggctgactaaatacttttttgccccactgtatatactgtattatattagaTTCTACTGTATTTTTTGTCTATGCCGCTCTGGCATCgcttgtccaaatatttatatattcttaactcCATTCATTTACTTTcagtttgtgtgtattgtgtgtattgttgtgaaattgttagatattacttgttagatagtactgcactgttggagcgagaaacacaagcattttgcaacatctgctaaacatatgaccaataacatttcatttgacatAATGTTAGCAGTGTGATTACTTTAAAGTTCAGTGTTAGAtttaaaatctgatttaaaaaaagatacattgtagaaataggcggggtttagccataattatgactttTTGTAAGTAGTGACATCCCTTTCCCTTCGCCGCTTCCTCTTTTCTCTAATGAGCACAGTAAAGCAGGCCGAAATGGCTCCTACAAAAAGGGCTTGTCAATTTGAACAACAGCCAACAAATGACTGGTATTTTTGTTATCCCTTCATTTACATTAAATGTGGTTACTTTATCGAGGGCGTAATAACCTGGAAATCTTGCTAAAAATAAAGTGGCGG
>TU1935552
CCTGGCCCTCAGAGCCAACCTAGCATAGAGACCCACACATCTGCTAGAGAGAGCTGCGCTCAGCGCCCACGCCCACTCTTCTGGCTAGCCTTCACCCAAGCAGCAGAAGAGGACTTCAGAGAGGGATTGAACACATAAGCAGCTGCACACATCAACCAGCTAACTAATAACCATGAATCTCGAGGTCCCCAAGTTGGAGATCAAGTCTGCCACCCGTGTCACTGGAGGCCCTGCAACACCACGTAAGGGACCCCCTAAATTCAAGCAGAGGCAGACTCGCCAGTTCAAGAGCAAGCCCCCCAAGAAGGGAATTCAGGGCTTTGGCGATGACATCCCTGGAATGGAGGGCTTAGGCACTGACATCACAGTAATCTGCCCCTGGGAGGCCTTCAACCACCTGGAGCTTAGTGAACTGGCCAAATATGGTATCATCTAAGTCATCCAGACCTTCACCATCCATCCCGCAGTCCTCTGCATCCACCTCCGTCTACTTCAAGCCATGCATGTGCCTCGAGCACTCTCACTGGGTTTGACTAGAACTTTTCAAACATAAACCAAAgaataaagaaataaagaaaacgTTACAGAAAAACAACTGTCTACACtcttatctagaacctaaaagggttctactGCTGTTTCCGTTGTAGAACCCTTTGTAGACC

Function

NR:

description
Retinal rod rhodopsin-sensitive cGMP 3,5-cyclic phosphodiesterase subunit gamma

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935557 False 4799 lncRNA 0.41 4 38478761 38485362
TU1935552 True 665 TUCP 0.50 4 38482895 38485362

Neighbor

gene id symbol gene type direction distance location
LOC110499450 LOC106589897 coding downstream 66315 38402819 ~ 38412446 (-)
rtst6galnac rtst6galnac coding downstream 120020 38342990 ~ 38358741 (-)
LOC110499449 LOC106589899 coding downstream 158647 38216877 ~ 38320114 (-)
LOC110499443 rbfox3 coding downstream 1281612 37055953 ~ 37197149 (-)
LOC118942469 NA coding downstream 1532380 36946266 ~ 36946381 (-)
oxld1 LOC106589895 coding upstream 4146 38489508 ~ 38492111 (-)
LOC110499451 LOC106589894 coding upstream 30240 38515602 ~ 38527974 (-)
LOC110499599 NA coding upstream 52477 38537839 ~ 38545503 (-)
kcnj2a LOC106589892 coding upstream 268395 38753757 ~ 38762601 (-)
LOC110499456 LOC106589891 coding upstream 296665 38782027 ~ 38801044 (-)
G1692301 NA non-coding downstream 92890 38385331 ~ 38385871 (-)
G1692295 NA non-coding downstream 104018 38374450 ~ 38374743 (-)
G1692279 NA non-coding downstream 137698 38340605 ~ 38341063 (-)
G1692169 NA non-coding downstream 153422 38325051 ~ 38325339 (-)
G1692132 NA non-coding downstream 186330 38264929 ~ 38292431 (-)
G1692340 NA non-coding upstream 1387 38486749 ~ 38487028 (-)
G1692345 NA non-coding upstream 14597 38499959 ~ 38500290 (-)
G1692348 NA non-coding upstream 16994 38502356 ~ 38502732 (-)
G1692371 NA non-coding upstream 50003 38535365 ~ 38535565 (-)
G1692383 NA non-coding upstream 61657 38547019 ~ 38547248 (-)
G1691432 NA other downstream 1239451 37238827 ~ 37239310 (-)
LOC110499438 LOC106589865 other downstream 1582555 36891846 ~ 36896982 (-)
G1690696 NA other downstream 1668618 36809699 ~ 36810143 (-)
G1690649 NA other downstream 1775320 36702546 ~ 36703441 (-)
G1690367 NA other downstream 2058161 36418789 ~ 36420600 (-)
G1692405 NA other upstream 82018 38567380 ~ 38568189 (-)
LOC110499457 LOC106589889 other upstream 518438 38982955 ~ 39006598 (-)
LOC110499545 hid1 other upstream 588716 39070043 ~ 39101170 (-)
G1693092 NA other upstream 778939 39264301 ~ 39264691 (-)
LOC110499543 LOC106589896 coding downstream 3944 38445288 ~ 38478951 (-)

Expression


Co-expression Network