G1692405



Basic Information


Item Value
gene id G1692405
gene name NA
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38567380 ~ 38568189 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1935682
GGACGGGTTGTTACGAGTCATACATCGGAGGGTGGTTTCCAGCTCTTGATTCATCCTCTCTGTTTGACCGTTGGACTCCGGATGGTACCCTGAAGATAGACTGGCAGAAGCCCCCATGAGTTGGCAGAAGGCCTTCCAAAACCTTGAGGCGAACTGGGGACCTCTGTCAGAAACCATATCTTGAGGAATGCCGAAGACTCGGAACACATGATTAATTACCAACTCAGCAGTTTCCTTGGCAGAAGGTAACTTAGTCAGAGGGACGAACCTGGCCGCCTTAGAAAACCTGTCGATTATGACTAGGATAGTAGTATTGCCATGGGATGGAGGAAGGCCAGTAATAAAGTCCAACGAGATATGGGGTCTGTGGGGAACAGGTAAAGGGTGAAGGAGTCCTTGAGGGCGGAGGTGAGAAGATTTGCCCTGGCAGCACACAGGGCAGGCATTGACGAAAATGGCAACGTCTTCTCTTATGGTAGGCCACCAGAACTTACGCTGGATGAACTCCAAGGTGCGACCTACGCCCGGATGACAGGTGAGGCGAGAGGAGTGCCCCCACAGAAGGACCTGAGTCCTCACTGCCTTGGGGACAAACAACCGATTGGCAGGGCCTCCTTTCGGGTCCGGTTCAATAGCTTGAGCTCGTCTCACGGTATCCTCAACTTGCCACGAGATCGGAGCCACGATCTTAGCAGCAGGAAGGACAGGCATGTCCGTGTCATCTCGAATGGCAGGAGCGTAGACTCGGGACAGGGCATCCGGTTTGAGATTCTTCGACCCGGGCCGATAGGTGAGGATAAACTGGAATCG

Function


NR:

description
uncharacterized protein lrfn4b isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1935682 True 810 TUCP 0.53 1 38567380 38568189

Neighbor


gene id symbol gene type direction distance location
LOC110499599 NA coding downstream 21877 38537839 ~ 38545503 (-)
LOC110499451 LOC106589894 coding downstream 39406 38515602 ~ 38527974 (-)
oxld1 LOC106589895 coding downstream 75269 38489508 ~ 38492111 (-)
LOC110499454 cnrg coding downstream 81970 38482976 ~ 38485410 (-)
LOC110499543 LOC106589896 coding downstream 88429 38445288 ~ 38478951 (-)
kcnj2a LOC106589892 coding upstream 185568 38753757 ~ 38762601 (-)
LOC110499456 LOC106589891 coding upstream 213838 38782027 ~ 38801044 (-)
tvp23b LOC106589890 coding upstream 397399 38965588 ~ 38972051 (-)
LOC110499457 LOC106589889 coding upstream 414766 38982955 ~ 39006598 (-)
LOC110499458 LOC106589887 coding upstream 438597 39006786 ~ 39026027 (-)
G1692391 NA non-coding downstream 11347 38555831 ~ 38556033 (-)
G1692388 NA non-coding downstream 15619 38551458 ~ 38551761 (-)
G1692383 NA non-coding downstream 20132 38547019 ~ 38547248 (-)
G1692371 NA non-coding downstream 31815 38535365 ~ 38535565 (-)
G1692348 NA non-coding downstream 64648 38502356 ~ 38502732 (-)
G1692409 NA non-coding upstream 2228 38570417 ~ 38570618 (-)
G1692410 NA non-coding upstream 3818 38572007 ~ 38572224 (-)
G1692524 NA non-coding upstream 58851 38627040 ~ 38634423 (-)
G1692526 NA non-coding upstream 67671 38635860 ~ 38637134 (-)
G1692527 NA non-coding upstream 69004 38637193 ~ 38637861 (-)
G1692288 cnrg other downstream 82018 38478761 ~ 38485362 (-)
G1691432 NA other downstream 1328070 37238827 ~ 37239310 (-)
LOC110499438 LOC106589865 other downstream 1671174 36891846 ~ 36896982 (-)
G1690696 NA other downstream 1757237 36809699 ~ 36810143 (-)
LOC110499545 hid1 other upstream 505889 39070043 ~ 39101170 (-)
G1693092 NA other upstream 696112 39264301 ~ 39264691 (-)
G1693393 NA other upstream 895241 39463430 ~ 39490078 (-)
G1693485 LOC106589879 other upstream 1045168 39613357 ~ 39614826 (-)

Expression



Co-expression Network