G1692480


Basic Information

Item Value
gene id G1692480
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38681090 ~ 38681414 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935776
cctaacctaaccataacattaaacctaaccctaacctaaccataacattaaacctaaccctaacctaaccattacattaaacctaaccctaaccctaaccataacattaaacctaaccctaatcctaaccctaaccctaacctaaccataacattaaacctaaccctaacctaaccataacattaaacctaaccctaaccctaacctaaccataacattaaacctaaccctaaccctaaccataacattaaacctaaccctaaccctaaccctaacctaaccattacattaaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935776 True 295 lncRNA 0.37 2 38681090 38681414

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 40441 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 42318 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 86785 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 477120 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 599820 38075973 ~ 38081270 (+)
LOC110499463 LOC106589886 coding downstream 375622 39057036 ~ 39068138 (+)
plaub plau coding downstream 429476 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 442664 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 462542 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 735455 39416869 ~ 39418951 (+)
G1692477 NA non-coding upstream 2038 38678740 ~ 38679052 (+)
G1692473 NA non-coding upstream 6187 38670141 ~ 38674903 (+)
G1692471 NA non-coding upstream 9306 38663099 ~ 38671784 (+)
G1692463 NA non-coding upstream 26322 38654559 ~ 38654768 (+)
G1692462 NA non-coding upstream 26780 38654072 ~ 38654310 (+)
G1692483 NA non-coding downstream 6689 38688103 ~ 38688329 (+)
G1692486 NA non-coding downstream 13486 38694900 ~ 38695154 (+)
G1692564 NA non-coding downstream 26506 38707920 ~ 38708125 (+)
G1692566 NA non-coding downstream 28239 38709653 ~ 38710179 (+)
G1692570 NA non-coding downstream 33573 38714987 ~ 38715218 (+)
G1692406 NA other upstream 111644 38568269 ~ 38569446 (+)
G1691992 NA other upstream 452539 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 458355 38222505 ~ 38222735 (+)
G1691267 NA other upstream 872029 37804543 ~ 37809061 (+)
G1691189 NA other upstream 1027026 37650626 ~ 37654064 (+)
G1692568 NA other downstream 29537 38710951 ~ 38712291 (+)
G1692702 NA other downstream 158520 38839934 ~ 38840271 (+)
G1693184 NA other downstream 674931 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1199935 39881349 ~ 39881843 (+)
G1693700 NA other downstream 1200544 39881958 ~ 39882625 (+)

Expression


Co-expression Network