G1692566


Basic Information

Item Value
gene id G1692566
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 38709653 ~ 38710179 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1935892
AGGTAGGTGGCCGGgaatcctagtggttagagcgttgggctagtaaccgtaaaggttgcaggatcgaatccccgagctgacaaggtgaaaatatgtttttctgccgctgaacagacagttaacccactgttcctaggccgtcattgaaaataagaatttgtttttaactgacttgcctggttaagtaaataaaggttaaataaaaaccaAAGGGTATGTTGGGACAAAGGACCTTTTTAGGAAACGATACAGAAAATGTATAATTtcaccaaatatttaggaagaggccATCATTTCATGAAGTCTGTGAAGGAGAAAAACCACATgaaaaaagtggtaagcaagttaagtccccccaaaaaataatttaCACCAAGTCAAATAACTGTTATGATGCTTGTATTTATACCTAAGTAGATAAATGAAAAAGTCTGTGTTTAAAAAAATGCTTAAAATAATTTAAAAGACAAAAAATAGATTGTGATTGTCTTGAATTGTGTTTGGTAAATAAAGACATGGTTTTTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1935892 True 527 lncRNA 0.35 1 38709653 38710179

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 69004 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 70881 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 115348 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 505683 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 628383 38075973 ~ 38081270 (+)
LOC110499463 LOC106589886 coding downstream 346857 39057036 ~ 39068138 (+)
plaub plau coding downstream 400711 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 413899 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 433777 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 706690 39416869 ~ 39418951 (+)
G1692564 NA non-coding upstream 1528 38707920 ~ 38708125 (+)
G1692486 NA non-coding upstream 14499 38694900 ~ 38695154 (+)
G1692483 NA non-coding upstream 21324 38688103 ~ 38688329 (+)
G1692480 NA non-coding upstream 28239 38681090 ~ 38681414 (+)
G1692477 NA non-coding upstream 30601 38678740 ~ 38679052 (+)
G1692570 NA non-coding downstream 4808 38714987 ~ 38715218 (+)
G1692572 NA non-coding downstream 6476 38716655 ~ 38716857 (+)
G1692625 NA non-coding downstream 53069 38763248 ~ 38763488 (+)
G1692647 NA non-coding downstream 80903 38791082 ~ 38791286 (+)
G1692649 NA non-coding downstream 82173 38792352 ~ 38792632 (+)
G1692406 NA other upstream 140207 38568269 ~ 38569446 (+)
G1691992 NA other upstream 481102 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 486918 38222505 ~ 38222735 (+)
G1691267 NA other upstream 900592 37804543 ~ 37809061 (+)
G1691189 NA other upstream 1055589 37650626 ~ 37654064 (+)
G1692568 NA other downstream 772 38710951 ~ 38712291 (+)
G1692702 NA other downstream 129755 38839934 ~ 38840271 (+)
G1693184 NA other downstream 646166 39356345 ~ 39359635 (+)
G1693699 NA other downstream 1171170 39881349 ~ 39881843 (+)
G1693700 NA other downstream 1171779 39881958 ~ 39882625 (+)

Expression


Co-expression Network