G1692860


Basic Information

Item Value
gene id G1692860
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39038618 ~ 39040041 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1936221
aagagagacaccacaacactacatagagagagacaccacaacactacataaagagagacaccacaacactacatagagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacagtacaacactacataaagagagacaccacaacactacataaagagagacaacacaacactacataaagagagacaccacaacactacataaagagacaacacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacaccacaacactacataaagagagacctaagacaacaacatagcatggtagcaacacaacatggcagcagcacaaaatatGATACAAATATTAtttggcacagacaacagcacaaaggggcaagaaggtagagacaacaatacatcacgcaaagcagccacaactgtcagtaagagagtCCATgaatgagtctttgaatgaagagagactgagataaagtgacccagggatgtgtgtactCTGTGGACTTTcgacagaatgtgactggcagaacaggtgtataAC

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1936221 True 641 lncRNA 0.41 2 39038618 39040041

Neighbor

gene id symbol gene type direction distance location
LOC118942016 NA coding upstream 397969 38639595 ~ 38640649 (+)
LOC110499544 mkk6c coding upstream 399846 38594819 ~ 38638772 (+)
LOC110499600 NA coding upstream 444313 38580735 ~ 38594305 (+)
LOC110499447 LOC106589900 coding upstream 834648 38083895 ~ 38203970 (+)
LOC110499446 LOC106589902 coding upstream 957348 38075973 ~ 38081270 (+)
LOC110499463 LOC106589886 coding downstream 16995 39057036 ~ 39068138 (+)
plaub plau coding downstream 70849 39110890 ~ 39118850 (+)
LOC110499465 LOC106589883 coding downstream 84037 39124078 ~ 39196200 (+)
LOC118942069 NA coding downstream 103915 39143956 ~ 39150402 (+)
LOC118942017 NA coding downstream 376828 39416869 ~ 39418951 (+)
G1692851 LOC106589887 non-coding upstream 12112 39019155 ~ 39026506 (+)
G1692850 NA non-coding upstream 21890 39016074 ~ 39016728 (+)
G1692818 NA non-coding upstream 31561 39005266 ~ 39007057 (+)
G1692824 NA non-coding upstream 56271 38981267 ~ 38982347 (+)
G1692838 NA non-coding upstream 61034 38976893 ~ 38977584 (+)
G1692870 NA non-coding downstream 19453 39059494 ~ 39060106 (+)
G1692906 NA non-coding downstream 98961 39139002 ~ 39139289 (+)
G1692913 NA non-coding downstream 118706 39158747 ~ 39159276 (+)
G1692916 NA non-coding downstream 132489 39172530 ~ 39175253 (+)
G1693053 NA non-coding downstream 181503 39221544 ~ 39221809 (+)
G1692702 NA other upstream 198347 38839934 ~ 38840271 (+)
G1692568 NA other upstream 326327 38710951 ~ 38712291 (+)
G1692406 NA other upstream 469172 38568269 ~ 38569446 (+)
G1691992 NA other upstream 810067 38228015 ~ 38228551 (+)
G1691990 aatk other upstream 815883 38222505 ~ 38222735 (+)
G1693184 NA other downstream 316304 39356345 ~ 39359635 (+)
G1693699 NA other downstream 841308 39881349 ~ 39881843 (+)
G1693700 NA other downstream 841917 39881958 ~ 39882625 (+)
G1693914 NA other downstream 1171481 40211522 ~ 40212953 (+)
G1695272 NA other downstream 2577986 41618027 ~ 41618505 (+)

Expression


Co-expression Network