G1693316


Basic Information

Item Value
gene id G1693316
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39656836 ~ 39658192 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1936747
gcacataccaacacatacagcacataccaacacataccaacacatactgcacataccaacacatacagcatatACTtacacataccagcacataccagcacataccagcacataccaacacataccaacacatacaacatataccacacataccaacacatacagcatatACTtacacataccagcacataccagcacattccagcacatacaacacatacagcacatacagcaAACCCACACATACAGCATATACTAACACATACCaagacatacagcacataccaacatataccacacatacagcacataccaacacatacagcacatacaacacataccaacatataccacacatactaacacATACAGCACATTCTAACACATACAGCACGTACCAACACATACTAACACATATAGCACATACTAACACATACTAACACATACTaacacataccagcacataccatcacataccaacacatacagcacatacagcacataccaacacatatcaacacatacagcacatagtaacccataccaacacacacagcatataccaacacatacagcacagactaacacatacagcacatactacAAATGTAGAAGCATCTTCTAAGTGGTCttatgtacagtggcttgcgaaagtattcgcccccattgcattttccatattttgttgccttacaatatGGAATTAAAACAgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1936747 True 715 lncRNA 0.39 3 39656836 39658192

Neighbor

gene id symbol gene type direction distance location
LOC110499546 LOC106589879 coding upstream 38456 39516539 ~ 39618380 (+)
LOC118942017 NA coding upstream 237885 39416869 ~ 39418951 (+)
LOC110499465 LOC106589883 coding upstream 460636 39124078 ~ 39196200 (+)
LOC118942069 NA coding upstream 506434 39143956 ~ 39150402 (+)
plaub plau coding upstream 537986 39110890 ~ 39118850 (+)
LOC110499467 LOC106589877 coding downstream 12858 39671050 ~ 39678438 (+)
LOC110499468 vdac2 coding downstream 25403 39683595 ~ 39687922 (+)
mgme1 mgme1 coding downstream 781729 40439921 ~ 40443984 (+)
ephx5 LOC105009996 coding downstream 796602 40454794 ~ 40467136 (+)
LOC110499485 NA coding downstream 829764 40487956 ~ 40490785 (+)
G1693313 NA non-coding upstream 268 39638075 ~ 39656568 (+)
G1693312 NA non-coding upstream 15227 39637881 ~ 39641609 (+)
G1693289 NA non-coding upstream 77806 39576326 ~ 39579030 (+)
G1693215 NA non-coding upstream 245068 39411514 ~ 39411768 (+)
G1693213 NA non-coding upstream 253680 39400167 ~ 39403156 (+)
G1693321 LOC106589878 non-coding downstream 7060 39665252 ~ 39668313 (+)
G1693340 NA non-coding downstream 70454 39728646 ~ 39746677 (+)
G1693575 NA non-coding downstream 113798 39771990 ~ 39772253 (+)
G1693582 NA non-coding downstream 119582 39777774 ~ 39778014 (+)
G1693584 NA non-coding downstream 119942 39778134 ~ 39778385 (+)
G1693184 NA other upstream 297201 39356345 ~ 39359635 (+)
G1692702 NA other upstream 816565 38839934 ~ 38840271 (+)
G1692568 NA other upstream 944545 38710951 ~ 38712291 (+)
G1692406 NA other upstream 1087390 38568269 ~ 38569446 (+)
G1691992 NA other upstream 1428285 38228015 ~ 38228551 (+)
G1693699 NA other downstream 223157 39881349 ~ 39881843 (+)
G1693700 NA other downstream 223766 39881958 ~ 39882625 (+)
G1693914 NA other downstream 553330 40211522 ~ 40212953 (+)
G1695272 NA other downstream 1959835 41618027 ~ 41618505 (+)
LOC110499605 LOC106590859 other downstream 2851439 42484544 ~ 42511247 (+)

Expression


Co-expression Network