G1693783


Basic Information

Item Value
gene id G1693783
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 39963933 ~ 39964625 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1937302
tttgaactcttattcactgcagaagtgatacctcctagccgttgagttagcaacagcagctgcaaacgagggttaggaaggaacagacagagtatcccgtctatcatacaacgacattactacaacgtacccaattgaccaccagagacattcttcaaaggacaaaggactcggtttggcaacacggccttccatctaccaccaacctaacgaagcgcagctcagagtaaatatttattgcattttccttttccttttttgggcagtaatttagaatgcataagatactgtatttacgatagcacagcttctacCTTTGTCCCtaagtcttcccgctctttcactcaaacccagctcCTTTTCTTTtttgtaaccagctgtcatatctgttctgcccgctagggacgttttcctttatgacgtaatttgtaatcaaggtattaTTCATTCTTTGtctatgtaattctgtgtgattagttaggtatttagtaaataaataattaaacccaattttgtattgctgattcaacttgttagccagggttcgtgaagataaccaagaatttacaactttcagatgagactgaattaaggtgacgattaatattgactgctattgatgtaaaatattactaggtctttaagagtttattcggaagataacagctctataaatattattttgtggtgccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1937302 True 693 lncRNA 0.38 1 39963933 39964625
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110499470 LOC106589875 coding downstream 163787 39797003 ~ 39800146 (-)
comtd1 cmtd1 coding downstream 267380 39688077 ~ 39696553 (-)
LOC110499466 LOC106589878 coding downstream 295576 39664970 ~ 39668357 (-)
LOC110499601 NA coding downstream 305579 39630826 ~ 39658354 (-)
LOC118942070 NA coding downstream 393891 39569361 ~ 39570042 (-)
LOC100301650 LOC106611671 coding upstream 146731 40111355 ~ 40313496 (-)
LOC110499472 LOC106589908 coding upstream 367040 40331665 ~ 40350083 (-)
LOC110499553 LOC106589909 coding upstream 392615 40357234 ~ 40399083 (-)
LOC110517611 snx5 coding upstream 456430 40420879 ~ 40439528 (-)
LOC110499484 LOC106589915 coding upstream 485663 40450288 ~ 40453626 (-)
G1693761 NA non-coding downstream 22432 39940482 ~ 39941501 (-)
G1693707 NA non-coding downstream 74691 39889038 ~ 39889242 (-)
G1693697 NA non-coding downstream 84874 39878752 ~ 39879059 (-)
G1693569 NA non-coding downstream 204891 39757720 ~ 39759042 (-)
G1693561 NA non-coding downstream 206739 39727600 ~ 39757194 (-)
G1694085 NA non-coding upstream 4822 39969447 ~ 39969907 (-)
G1694148 NA non-coding upstream 112035 40076660 ~ 40077148 (-)
G1694152 NA non-coding upstream 118352 40082977 ~ 40083203 (-)
G1694156 NA non-coding upstream 130380 40095005 ~ 40095906 (-)
G1694157 NA non-coding upstream 131337 40095962 ~ 40096162 (-)
G1693485 LOC106589879 other downstream 349107 39613357 ~ 39614826 (-)
G1693393 NA other downstream 473855 39463430 ~ 39490078 (-)
G1693092 NA other downstream 699242 39264301 ~ 39264691 (-)
LOC110499545 hid1 other downstream 889099 39070043 ~ 39101170 (-)
LOC110499548 hyep other upstream 531265 40472724 ~ 40497881 (-)
G1694632 NA other upstream 948769 40913394 ~ 40914130 (-)
G1694739 NA other upstream 1048549 41013174 ~ 41013994 (-)

Expression

G1693783 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 20.
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G1693783 Expression in each Bioproject

Bar chart with 20 bars.
G1693783 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network