G1693843


Basic Information

Item Value
gene id G1693843
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 40080344 ~ 40080635 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1937372
TTCACGTATATACCGATTGTGTATAAGTTTAAGGAGTGTTGTTTTTCATCCTTCCGTGAGTAACTGTGTTCTCTTTTGTCGTGggcatttattttggtattgtacCTGACCCTATTGTTGTGGACTTGCCTATTAAAAGACGCTACTTggacatctctgctctcctgcgcttgACTCTTTCACCTACCTCTAAATACAATATCGCAACAGTGCCATTATGAAGAATTTAAATTGTAAGGCCTTTTAACTTGTAGCAATGGGCACCCTCGAAtatcttaattataggctactt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1937372 True 292 lncRNA 0.39 1 40080344 40080635

Neighbor

gene id symbol gene type direction distance location
LOC110499468 vdac2 coding upstream 392422 39683595 ~ 39687922 (+)
LOC110499467 LOC106589877 coding upstream 401906 39671050 ~ 39678438 (+)
LOC110499546 LOC106589879 coding upstream 461964 39516539 ~ 39618380 (+)
LOC118942017 NA coding upstream 661393 39416869 ~ 39418951 (+)
LOC118942069 NA coding upstream 929942 39143956 ~ 39150402 (+)
mgme1 mgme1 coding downstream 359286 40439921 ~ 40443984 (+)
ephx5 LOC105009996 coding downstream 374159 40454794 ~ 40467136 (+)
LOC110499485 NA coding downstream 407321 40487956 ~ 40490785 (+)
LOC118942071 NA coding downstream 418322 40498957 ~ 40502399 (+)
LOC110499549 LOC106589914 coding downstream 445358 40525993 ~ 40587582 (+)
G1693788 NA non-coding upstream 110451 39969426 ~ 39969893 (+)
G1693719 NA non-coding upstream 160071 39917901 ~ 39920273 (+)
G1693704 NA non-coding upstream 191296 39888849 ~ 39889048 (+)
G1693695 NA non-coding upstream 201158 39878828 ~ 39879186 (+)
G1693584 NA non-coding upstream 301959 39778134 ~ 39778385 (+)
G1693845 NA non-coding downstream 1853 40082488 ~ 40082699 (+)
G1693846 NA non-coding downstream 2500 40083135 ~ 40083644 (+)
G1693847 NA non-coding downstream 10550 40091185 ~ 40091986 (+)
G1693858 NA non-coding downstream 30731 40111366 ~ 40112291 (+)
G1693866 NA non-coding downstream 39228 40119863 ~ 40120455 (+)
G1693700 NA other upstream 197719 39881958 ~ 39882625 (+)
G1693699 NA other upstream 198501 39881349 ~ 39881843 (+)
G1693184 NA other upstream 720709 39356345 ~ 39359635 (+)
G1692702 NA other upstream 1240073 38839934 ~ 38840271 (+)
G1692568 NA other upstream 1368053 38710951 ~ 38712291 (+)
G1693914 NA other downstream 130887 40211522 ~ 40212953 (+)
G1695272 NA other downstream 1537392 41618027 ~ 41618505 (+)
LOC110499605 LOC106590859 other downstream 2428996 42484544 ~ 42511247 (+)
LOC118942073 NA other downstream 2441875 42522510 ~ 42527008 (+)
G1696324 NA other downstream 2699364 42779999 ~ 42780549 (+)

Expression


Co-expression Network