Gene
RNA
| Item | Value |
|---|---|
| gene id | G1694606 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 40891495 ~ 40891978 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1938271 | True | 298 | lncRNA | 0.39 | 2 | 40891495 | 40891978 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499549 | LOC106589914 | coding | upstream | 303913 | 40525993 ~ 40587582 (+) |
| LOC118942071 | NA | coding | upstream | 389096 | 40498957 ~ 40502399 (+) |
| LOC110499485 | NA | coding | upstream | 400710 | 40487956 ~ 40490785 (+) |
| ephx5 | LOC105009996 | coding | upstream | 424359 | 40454794 ~ 40467136 (+) |
| mgme1 | mgme1 | coding | upstream | 447511 | 40439921 ~ 40443984 (+) |
| LOC118942019 | NA | coding | downstream | 796157 | 41688135 ~ 41696129 (+) |
| LOC110499555 | LOC106589919 | coding | downstream | 938036 | 41830014 ~ 41862392 (+) |
| parga | LOC106589925 | coding | downstream | 1282002 | 42173980 ~ 42282788 (+) |
| LOC110499494 | LOC106589929 | coding | downstream | 1516284 | 42408262 ~ 42413033 (+) |
| LOC110499602 | LOC106589930 | coding | downstream | 1524117 | 42416095 ~ 42419081 (+) |
| G1694605 | NA | non-coding | upstream | 979 | 40890282 ~ 40890516 (+) |
| G1694515 | NA | non-coding | upstream | 88260 | 40800992 ~ 40803235 (+) |
| G1694506 | NA | non-coding | upstream | 103681 | 40780969 ~ 40787814 (+) |
| G1694505 | NA | non-coding | upstream | 111510 | 40778897 ~ 40779985 (+) |
| G1694467 | NA | non-coding | upstream | 158449 | 40732832 ~ 40733046 (+) |
| G1694615 | NA | non-coding | downstream | 6692 | 40898670 ~ 40898944 (+) |
| G1694621 | NA | non-coding | downstream | 14170 | 40906148 ~ 40906408 (+) |
| G1694631 | NA | non-coding | downstream | 19686 | 40911664 ~ 40911898 (+) |
| G1694637 | NA | non-coding | downstream | 24289 | 40916267 ~ 40916503 (+) |
| G1694643 | NA | non-coding | downstream | 27834 | 40919812 ~ 40920041 (+) |
| G1693914 | NA | other | upstream | 678542 | 40211522 ~ 40212953 (+) |
| G1693700 | NA | other | upstream | 1008870 | 39881958 ~ 39882625 (+) |
| G1693699 | NA | other | upstream | 1009652 | 39881349 ~ 39881843 (+) |
| G1693184 | NA | other | upstream | 1531860 | 39356345 ~ 39359635 (+) |
| G1692702 | NA | other | upstream | 2051224 | 38839934 ~ 38840271 (+) |
| G1695272 | NA | other | downstream | 726049 | 41618027 ~ 41618505 (+) |
| LOC110499605 | LOC106590859 | other | downstream | 1617653 | 42484544 ~ 42511247 (+) |
| LOC118942073 | NA | other | downstream | 1630532 | 42522510 ~ 42527008 (+) |
| G1696324 | NA | other | downstream | 1888021 | 42779999 ~ 42780549 (+) |
| G1696541 | NA | other | downstream | 2241649 | 43133627 ~ 43134013 (+) |
