Gene
RNA
| Item | Value |
|---|---|
| gene id | G1695408 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 41705304 ~ 41724430 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1939177 | False | 2121 | lncRNA | 0.39 | 2 | 41705304 | 41710313 |
| TU1939178 | False | 1734 | lncRNA | 0.39 | 4 | 41705304 | 41715897 |
| TU1939179 | False | 812 | lncRNA | 0.40 | 5 | 41705304 | 41717778 |
| TU1939181 | False | 1753 | lncRNA | 0.40 | 6 | 41705304 | 41724430 |
| TU1939183 | False | 1374 | lncRNA | 0.39 | 2 | 41705304 | 41711961 |
| TU1939182 | True | 1511 | lncRNA | 0.40 | 4 | 41720465 | 41724430 |
41,692,000
41,696,000
41,700,000
41,704,000
41,708,000
41,712,000
41,716,000
41,720,000
41,724,000
41,728,000
41,732,000
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118942018 | NA | coding | downstream | 48257 | 41648488 ~ 41657047 (-) |
| LOC118942072 | NA | coding | downstream | 1180867 | 40522773 ~ 40524460 (-) |
| LOC110499548 | hyep | coding | downstream | 1207423 | 40472724 ~ 40497881 (-) |
| LOC110499484 | LOC106589915 | coding | downstream | 1251678 | 40450288 ~ 40453626 (-) |
| LOC110517611 | snx5 | coding | downstream | 1265776 | 40420879 ~ 40439528 (-) |
| LOC110499558 | LOC106589926 | coding | upstream | 615102 | 42339532 ~ 42365494 (-) |
| LOC110499491 | LOC106589927 | coding | upstream | 642413 | 42366843 ~ 42369973 (-) |
| LOC110499559 | LOC106589928 | coding | upstream | 667955 | 42392385 ~ 42400906 (-) |
| LOC110499560 | LOC106589931 | coding | upstream | 716447 | 42438602 ~ 42475200 (-) |
| LOC118942020 | NA | coding | upstream | 790230 | 42514660 ~ 42522180 (-) |
| G1695404 | NA | non-coding | downstream | 17998 | 41686891 ~ 41687306 (-) |
| G1695403 | NA | non-coding | downstream | 19140 | 41685954 ~ 41686164 (-) |
| G1695354 | NA | non-coding | downstream | 36946 | 41668131 ~ 41668358 (-) |
| G1695352 | NA | non-coding | downstream | 38483 | 41666620 ~ 41666821 (-) |
| G1695351 | NA | non-coding | downstream | 39282 | 41665647 ~ 41666022 (-) |
| G1695418 | NA | non-coding | upstream | 9416 | 41733846 ~ 41796006 (-) |
| G1695430 | NA | non-coding | upstream | 37972 | 41762402 ~ 41763200 (-) |
| G1695449 | NA | non-coding | upstream | 74558 | 41798988 ~ 41799417 (-) |
| G1695513 | NA | non-coding | upstream | 137770 | 41862200 ~ 41863303 (-) |
| G1695539 | NA | non-coding | upstream | 177475 | 41901905 ~ 41902909 (-) |
| G1695141 | NA | other | downstream | 292354 | 41412382 ~ 41412950 (-) |
| G1694757 | NA | other | downstream | 649738 | 41052006 ~ 41055566 (-) |
| G1694739 | NA | other | downstream | 691310 | 41013174 ~ 41013994 (-) |
| G1694632 | NA | other | downstream | 791174 | 40913394 ~ 40914130 (-) |
| G1695918 | NA | other | upstream | 278887 | 42003317 ~ 42003610 (-) |
| G1696001 | LOC106589925 | other | upstream | 450806 | 42175236 ~ 42176154 (-) |
| cisd1 | LOC106589936 | other | upstream | 857916 | 42582333 ~ 42587039 (-) |
| LOC110499563 | LOC106589940 | other | upstream | 1004636 | 42683879 ~ 42733292 (-) |
| G1696403 | NA | other | upstream | 1102165 | 42826595 ~ 42827235 (-) |
