G1695672


Basic Information

Item Value
gene id G1695672
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42122226 ~ 42122720 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1939468
atgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctcaggtcttttgcagactccatcaggttttcttccagaatggtcctgtatttggctccatacatcttcccatcaattttaaccatcttccctttccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagggtgatgagctgtgttgcttttacgccaaacataacgtcttgcattgttgccaaaaagttcaattttggtttcatctgaccagatcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacaacactttttattgatatctttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggac

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1939468 True 495 lncRNA 0.42 1 42122226 42122720

Neighbor

gene id symbol gene type direction distance location
LOC110499555 LOC106589919 coding upstream 259834 41830014 ~ 41862392 (+)
LOC118942019 NA coding upstream 426097 41688135 ~ 41696129 (+)
LOC110499549 LOC106589914 coding upstream 1534644 40525993 ~ 40587582 (+)
LOC118942071 NA coding upstream 1619827 40498957 ~ 40502399 (+)
LOC110499485 NA coding upstream 1631441 40487956 ~ 40490785 (+)
parga LOC106589925 coding downstream 51260 42173980 ~ 42282788 (+)
LOC110499494 LOC106589929 coding downstream 285542 42408262 ~ 42413033 (+)
LOC110499602 LOC106589930 coding downstream 293375 42416095 ~ 42419081 (+)
LOC110499605 LOC106590859 coding downstream 361824 42484544 ~ 42511247 (+)
LOC118942073 NA coding downstream 399817 42522510 ~ 42527008 (+)
G1695669 NA non-coding upstream 3387 42112527 ~ 42118839 (+)
G1695665 NA non-coding upstream 17764 42104252 ~ 42104462 (+)
G1695664 NA non-coding upstream 20628 42101321 ~ 42101598 (+)
G1695645 NA non-coding upstream 86104 42035880 ~ 42036122 (+)
G1695632 NA non-coding upstream 118125 42003716 ~ 42004101 (+)
G1695674 NA non-coding downstream 1868 42124588 ~ 42124909 (+)
G1695675 NA non-coding downstream 2897 42125617 ~ 42125922 (+)
G1695676 NA non-coding downstream 3393 42126113 ~ 42126315 (+)
G1695727 NA non-coding downstream 86534 42209254 ~ 42209629 (+)
G1695272 NA other upstream 503721 41618027 ~ 41618505 (+)
G1693914 NA other upstream 1909273 40211522 ~ 40212953 (+)
G1693700 NA other upstream 2239601 39881958 ~ 39882625 (+)
G1693699 NA other upstream 2240383 39881349 ~ 39881843 (+)
G1693184 NA other upstream 2762591 39356345 ~ 39359635 (+)
G1696324 NA other downstream 657279 42779999 ~ 42780549 (+)
G1696541 NA other downstream 1010907 43133627 ~ 43134013 (+)
LOC110499564 NA other downstream 1014673 43137388 ~ 43148369 (+)

Expression


Co-expression Network