G1695779


Basic Information

Item Value
gene id G1695779
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42348195 ~ 42348410 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1939611
GCACGTCTCTAGCCTGGGCCCATTCTGTTCTTCCATCTGACGTCAGCAGACCAAAAGGAGgctgtctctcctctgtgttcTCTGCCATCTTTACGATCTTCTCCAGTTGGCTTAAGATGTCCATTTCTCTCAGTGGTTTCTCCTTTACCACTAGGTCCATCACAAAGAACTGAGAAGAAGACAAATCCTTTTTAGAAATAGGATTGGATTTTTTTT

Function

NR:

description
PREDICTED: choline O-acetyltransferase-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1939611 True 216 lncRNA 0.44 1 42348195 42348410

Neighbor

gene id symbol gene type direction distance location
parga LOC106589925 coding upstream 65407 42173980 ~ 42282788 (+)
LOC110499555 LOC106589919 coding upstream 485803 41830014 ~ 41862392 (+)
LOC118942019 NA coding upstream 652066 41688135 ~ 41696129 (+)
LOC110499549 LOC106589914 coding upstream 1760613 40525993 ~ 40587582 (+)
LOC118942071 NA coding upstream 1845796 40498957 ~ 40502399 (+)
LOC110499494 LOC106589929 coding downstream 59852 42408262 ~ 42413033 (+)
LOC110499602 LOC106589930 coding downstream 67685 42416095 ~ 42419081 (+)
LOC110499605 LOC106590859 coding downstream 136134 42484544 ~ 42511247 (+)
LOC118942073 NA coding downstream 174127 42522510 ~ 42527008 (+)
LOC118942074 NA coding downstream 245594 42594004 ~ 42598619 (+)
G1695778 NA non-coding upstream 248 42347691 ~ 42347947 (+)
G1695772 NA non-coding upstream 5738 42342004 ~ 42342457 (+)
G1695770 LOC106589926 non-coding upstream 7543 42338019 ~ 42340652 (+)
G1695766 NA non-coding upstream 14459 42333248 ~ 42333736 (+)
G1695762 NA non-coding upstream 31648 42316153 ~ 42316547 (+)
G1695780 NA non-coding downstream 1671 42350081 ~ 42350408 (+)
G1695781 NA non-coding downstream 4870 42353280 ~ 42354061 (+)
G1695795 NA non-coding downstream 39948 42388358 ~ 42388583 (+)
G1695798 NA non-coding downstream 44068 42392478 ~ 42394407 (+)
G1695815 NA non-coding downstream 90330 42438740 ~ 42440591 (+)
G1695272 NA other upstream 729690 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2135242 40211522 ~ 40212953 (+)
G1693700 NA other upstream 2465570 39881958 ~ 39882625 (+)
G1693699 NA other upstream 2466352 39881349 ~ 39881843 (+)
G1693184 NA other upstream 2988560 39356345 ~ 39359635 (+)
G1696324 NA other downstream 431589 42779999 ~ 42780549 (+)
G1696541 NA other downstream 785217 43133627 ~ 43134013 (+)
LOC110499564 NA other downstream 788983 43137388 ~ 43148369 (+)

Expression


Co-expression Network