G1695798


Basic Information

Item Value
gene id G1695798
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42392478 ~ 42394407 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1939638
agggggatgaatacggTTGCAAAAGCACTGTATTGATACACCTTCCAAAGTGTAATTGACAACTTCACCATGCTCCAATGTCTGCTTGTTTTCTAtttttatccatctaccaataggtgcttctctttgcgaggcattggaaaccctccctggtctttgtggttgaatctttgtttcaaattcactgctcgactgaggcagataattgcatgtgtgggggTGCAAAGATGAGGGTAGTCGTTCAAAAACACTATTATTGTCCATACAACTAATtgcgtgacttgttaagcacattttttttttactcctgaacttatttaggcttgccatcaCAAAGGGGTTGTATACTTactgactcaaaacatttcatattttcatttttattaatttgtaaacattttcaaaaagcataattccactttgacataatggggtattgtgtgtaggccagcgaCAAAAGAAAAATCTACATTTCATCTATTTTAAAtcaaggctgtaacacaacaaaacgtggaaaaagtcacggggtgtgaatactttctgaaggcactgtatagtcagGGGTTTCAGCTGTCCCCAATGGAAccatatttcctatatagtgcactacttttggctagggcccatagggaataagATGCCATTCGAGACACAACCATAAAACCCCACAGGGTCCAGGAGACCCAACTAGACAACCACCACCATAGCATGAAATGGCTTGCTTAATAAATCAGAACTGGCTTCAAATAATATTTCATGTCAAATACTAATTAGccgggcttgattgagcttgcctggcacaatggaaACAATGAAATAGTAGCATAAAAGTAATCCTCACTCATCTGGCACTCCGGGCAGGCTAAAGTAAACGCTTAAGGTACTTTAAAgattttaaatagtatttgaactcaGgtctggcagCTATAGCTCTTTTGTAGTCtgatatttgaacccaggtctggtaggTATAGCTCTTTTGTAGTCtgatatttgaacccaggtctggtaggTATAGCTCTTTTGTAGTCtgatatttgaacccaggtctggtaggTATAGCTCTTTTGTAGTCtgatatttgaacccaggtctggtaggTATAGCTCTTTTGTAGTCtgatatttgaacccaggtctggtaggTATAGCTCTTTTGTAGTCtgatatttgaacccaggtctggtaggTATAGCTCTTTTGTAGTCtgatatttgaacccaggtcttgtAGGTATAGCTCTTTTTGTAGTCtgatatttgaacccaggtctggtaggTATAGCTCTTTTTGTAGTCTGATATTTGAACTCAGGTCTGGCAGCTATAGCTCTTTTGAAGTCTGAAGACTAAGTCACTCATCATTTACAGCTGTACAGTAAAGCGTGTTGAGCATCCCACCATTTCCATGGACAGTTGAGTCATATTGAAGAGCAGCACATGGCAGCACACCTCGCTGCGTTTATTGACAGTGATCAGAGGAAGACATCAGGGAAAGTTCTAGAAGTAAAGCTATTggatataaaatatgttttacattatcATGATTCCACTAAAATTCAGTCTCATCCACTTTAAGTTGATTACACTGGTTTTTACTTCCTTCAAAAAATCACTCAACATGAACATGTCATTTTAAGAGCACTGTGGAATTTCTACTAAAACATAGGTCAATGAGTGTCTAGTCAATCATCTCTAGTAAATCATGATACATCATTCAACCTAAGAACAGGTGCCTCTCCCCAAAGTCTATTTG

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1939638 True 1754 lncRNA 0.39 2 42392478 42394407

Neighbor

gene id symbol gene type direction distance location
parga LOC106589925 coding upstream 109690 42173980 ~ 42282788 (+)
LOC110499555 LOC106589919 coding upstream 530086 41830014 ~ 41862392 (+)
LOC118942019 NA coding upstream 696349 41688135 ~ 41696129 (+)
LOC110499549 LOC106589914 coding upstream 1804896 40525993 ~ 40587582 (+)
LOC118942071 NA coding upstream 1890079 40498957 ~ 40502399 (+)
LOC110499494 LOC106589929 coding downstream 13855 42408262 ~ 42413033 (+)
LOC110499602 LOC106589930 coding downstream 21688 42416095 ~ 42419081 (+)
LOC110499605 LOC106590859 coding downstream 90137 42484544 ~ 42511247 (+)
LOC118942073 NA coding downstream 128130 42522510 ~ 42527008 (+)
LOC118942074 NA coding downstream 199597 42594004 ~ 42598619 (+)
G1695795 NA non-coding upstream 3895 42388358 ~ 42388583 (+)
G1695781 NA non-coding upstream 38417 42353280 ~ 42354061 (+)
G1695780 NA non-coding upstream 42070 42350081 ~ 42350408 (+)
G1695779 NA non-coding upstream 44068 42348195 ~ 42348410 (+)
G1695778 NA non-coding upstream 44531 42347691 ~ 42347947 (+)
G1695815 NA non-coding downstream 44333 42438740 ~ 42440591 (+)
G1695816 NA non-coding downstream 49683 42444090 ~ 42445201 (+)
G1695817 NA non-coding downstream 51574 42445981 ~ 42446210 (+)
G1695818 NA non-coding downstream 54044 42448451 ~ 42448849 (+)
G1695819 NA non-coding downstream 54817 42449224 ~ 42449428 (+)
G1695272 NA other upstream 773973 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2179525 40211522 ~ 40212953 (+)
G1693700 NA other upstream 2509853 39881958 ~ 39882625 (+)
G1693699 NA other upstream 2510635 39881349 ~ 39881843 (+)
G1693184 NA other upstream 3032843 39356345 ~ 39359635 (+)
G1696324 NA other downstream 385592 42779999 ~ 42780549 (+)
G1696541 NA other downstream 739220 43133627 ~ 43134013 (+)
LOC110499564 NA other downstream 742986 43137388 ~ 43148369 (+)

Expression


Co-expression Network