G1696205


Basic Information

Item Value
gene id G1696205
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42574832 ~ 42576420 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940218
caagcctggtcccagatctgtttgataTCTACATCatcaagcctggtcccagatctgtctgatATCTACATCatcaagcctggtcccagatctgtttgataTCTACATCatcaagcctggtcccagatctgtctgatATCTACATCatcaagcctggtcccagatctgtttgataTCTACATCatcaagcctggtcccagatctgtctgatATCTACTTCaccaagcctggtcccagatctgtttaacATCTGCATCATCAAGTACTGATTCAGAGATGAAGGACCTCTACTAAACACCATGTACTGATTCAGAGATGCGTGAAGGACCTCTACTAAACACCATGTACTGATTCAGAGATGTCCGGTGAGAACAGAGCCAAAGGATGTTTTTTAATTtctaatttcacctttatttaatcaggtaagctagttgagaacaagttctcatttacaactgcgacctggccaagataaagcaaagcagtgcgacacaaacaaaaacacagagttacacataaacaaatgtacagtcgaTAACACATAgataataaaaaatttaaaaagtctatatacagtgtgtgcaaatggcgtgaggaggtaaggcaataaataggccatagtagcgaactaatttagcaaattaacactggagtgatagatgagcaaatgatgatgtgcaagtagaaatactggtgtgcagaagagcagaaaggtaaataaaaacaatatggggatgaggtagatgtcAGGGGAAAAAAGGGGTTTTACTGTCCccacacaacacactgcagttCACTTTAGGTACTTATACAACAAGTGTGTGTGGTTTCTAGGAGGAAAGTGATACATGGAAATATAATTAACCGGGCAAAGTTATATTCATGGGCTCAAGGAGTTAGATCTTTACATATATGCCCATTACTGCATCACACATGTTAAATACAATCAATAATGTCCTTAATTGAACACCATAAAGTTAAACATGCATAAAGCTTAAATAAACACTCCTCATATTGCAGTCCTTGAATAACAAATCAATGAACATTGATGGCTAAATAGTAAGCAGTCCCGGGTAGAGCCTGAAGCTAGCATTAGATACAGATGCACTATCTTCCCAATAAGGACTGAAATGTGACGAATGGCATGAGCTTCAACAGCACCCATGTAGCCTTAGCATTATCATTAGCTGTGGGCTACAAACATTTATCATGCTAACAAGCAATTAGCAGGTTAGGCAGGTCATGCTAACAAACAATTAGCAGGCTTGGCAGGTCACGCTACAAACATTTAGCCTAGCAAAGACACATACATGAGCACAAATACCAATCCCTGTAAACTGATTTTATTATCAACACTCAAATAGGGC

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940218 True 1367 lncRNA 0.40 3 42574832 42576420
Loading

Neighbor

gene id symbol gene type direction distance location
canb1 LOC106578839 coding downstream 3892 42526583 ~ 42570940 (-)
LOC118942020 NA coding downstream 52652 42514660 ~ 42522180 (-)
LOC110499560 LOC106589931 coding downstream 99632 42438602 ~ 42475200 (-)
LOC110499559 LOC106589928 coding downstream 173926 42392385 ~ 42400906 (-)
LOC110499491 LOC106589927 coding downstream 204859 42366843 ~ 42369973 (-)
cisd1 LOC106589936 coding upstream 5913 42582333 ~ 42587039 (-)
LOC110499497 NA coding upstream 11308 42587728 ~ 42588999 (-)
LOC110499498 LOC106578834 coding upstream 21340 42597760 ~ 42645259 (-)
LOC110499563 LOC106589940 coding upstream 107459 42683879 ~ 42733292 (-)
LOC110518228 mcu coding upstream 618414 43194834 ~ 43305004 (-)
G1696191 NA non-coding downstream 20184 42529519 ~ 42554648 (-)
G1696168 NA non-coding downstream 31367 42543027 ~ 42543465 (-)
G1696186 NA non-coding downstream 60895 42513636 ~ 42513937 (-)
G1696185 NA non-coding downstream 61271 42513358 ~ 42513561 (-)
G1696184 NA non-coding downstream 61865 42512458 ~ 42512967 (-)
G1696207 NA non-coding upstream 4545 42580965 ~ 42581362 (-)
G1696211 NA non-coding upstream 17750 42594170 ~ 42594396 (-)
G1696218 NA non-coding upstream 41030 42617450 ~ 42617665 (-)
G1696001 LOC106589925 other downstream 398678 42175236 ~ 42176154 (-)
G1695918 NA other downstream 571222 42003317 ~ 42003610 (-)
G1695141 NA other downstream 1161882 41412382 ~ 41412950 (-)
G1694757 NA other downstream 1519266 41052006 ~ 41055566 (-)
G1694739 NA other downstream 1560838 41013174 ~ 41013994 (-)
G1696403 NA other upstream 250175 42826595 ~ 42827235 (-)
G1696606 NA other upstream 305749 42882169 ~ 42882792 (-)
G1696673 NA other upstream 471318 43047738 ~ 43049363 (-)

Expression

G1696205 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1.5.
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G1696205 Expression in each Bioproject

Bar chart with 17 bars.
G1696205 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 60.
End of interactive chart.

Co-expression Network