G1695883


Basic Information

Item Value
gene id G1695883
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42579610 ~ 42579915 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1939782
tggttataCAGAGATAtcatctagaagaaaaagaaacgcacacctatttagacgcattcttgtgttctaactacccgctattcaaagtgctctgaacaaattaagggaattgttcacaaacattggcacatcctaaagtccgatgatagtctcggtaatgtgttttcggaccttcccttggtcgtattctcgcggggcagaaatctcagagaccaattggtacactctgatttaccaccccaagatattcctgaacgtctatttgcgcccttactggatggaaattacaagTGTAACGGCTAAAAA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1939782 True 306 lncRNA 0.42 1 42579610 42579915

Neighbor

gene id symbol gene type direction distance location
LOC118942073 NA coding upstream 52964 42522510 ~ 42527008 (+)
LOC110499605 LOC106590859 coding upstream 68853 42484544 ~ 42511247 (+)
LOC110499602 LOC106589930 coding upstream 160529 42416095 ~ 42419081 (+)
LOC110499494 LOC106589929 coding upstream 166577 42408262 ~ 42413033 (+)
parga LOC106589925 coding upstream 296822 42173980 ~ 42282788 (+)
LOC118942074 NA coding downstream 14089 42594004 ~ 42598619 (+)
LOC110499499 LOC106589923 coding downstream 75842 42655757 ~ 42660010 (+)
LOC110499501 sft2a coding downstream 165249 42745164 ~ 42774109 (+)
LOC118942075 NA coding downstream 223674 42803589 ~ 42827234 (+)
tbxtb LOC106589941 coding downstream 266131 42846046 ~ 42851739 (+)
G1695880 NA non-coding upstream 889 42578472 ~ 42578721 (+)
G1695881 NA non-coding upstream 5295 42573210 ~ 42574315 (+)
G1695877 NA non-coding upstream 10714 42567910 ~ 42568896 (+)
G1695870 NA non-coding upstream 21091 42557404 ~ 42558519 (+)
G1695864 NA non-coding upstream 39440 42539734 ~ 42540170 (+)
G1695886 NA non-coding downstream 2442 42582357 ~ 42592798 (+)
G1695890 NA non-coding downstream 7836 42587751 ~ 42588871 (+)
G1695903 LOC106578834 non-coding downstream 30978 42610893 ~ 42611694 (+)
G1695887 NA non-coding downstream 35564 42615479 ~ 42615821 (+)
G1695272 NA other upstream 961105 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2366657 40211522 ~ 40212953 (+)
G1693700 NA other upstream 2696985 39881958 ~ 39882625 (+)
G1696324 NA other downstream 200084 42779999 ~ 42780549 (+)
G1696541 NA other downstream 553712 43133627 ~ 43134013 (+)
LOC110499564 NA other downstream 557478 43137388 ~ 43148369 (+)
G1696563 NA other downstream 627644 43207559 ~ 43209518 (+)
G1696904 NA other downstream 1043569 43623484 ~ 43626360 (+)

Expression


Co-expression Network