G1695886


Basic Information

Item Value
gene id G1695886
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42582357 ~ 42592798 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1939785
ggaTGATTAAATGATTGATTAAAATGAAGTCACATATTGTAGAAATCTAAGGTCACAGACTGTAGACATTAACATTCTCACACTAGTGTCAGCGTCTcccccaaactcagtcctggggaacCCAAGGAGTGCACATTTTGGCCCAGCACTACACAGCGGATTCAAATAGTCAAAGCTTGTTGATAAGCTGATTCATTTGATTAAGctgtgtagtgccaggacaaaaaacaaaatgtgcactcCTTGGGGTCCCCCAAGATAGAGTTTGGGGGAAACGCTGCACTACATAGAACAGTGAATTATTAAAGCTAGTTACCAGAAGTGCTGCTTGACAAGTTCAGTTTCAGCCACTCAAACATTCAGTAGGCTACAGGGCTGTGTTAAGTAGGGCAAaacgtagcaaaacattttttttttttttttttaaacgaaaaCTAAACTTGGGATTGTTTCTCTAGTAAAGCTACCTCCTAGTTTCACAACATCGCATGTTTGGCTTTTTTCtcccactgaacacaacccaggaaTCCAAATGGTATGTAGCATGGATGGAACAAGTTTAACTTGTTGATTCACCGTTAACACAGACTTAAAAATCAACAAGGTAATCATTACGACGGCTTCATTTGCAGATATGAATGATGTAGAACCTGTCATCTAAAATCCATTGAAAAGTGACACCATTTTACAATCGATTTCACAAGTTGAATCAAAAATAAAAGGTCACACCTCATCCGTTTCCTTGATGCTTCAGTAGCCCCAGGTGTTTTTCCTGACCatggaaaaactctgggcccctAGTTACAGCTGCAATAAAAaggtacagagatatccttgatcaAGTCccgtggtcaggaaaaactcctgagTATCAACCATAGAGGACTCTACTGCCGAAAAGCccgttttagcatggacattgccattgaggactttcaccatttttaagtagtcaactgggtgggacttcctatgggttaaggaagtCTCACATAATTCCATCAAGGTCATCAGgcgggatcagccaatgaattatattTGTgcgcaaacattccataactccaggtggcagtaaatcaccagCCTTGGCTtcatacctgttcagacaacaccctctagGGGGCAGTATGAGCCCTTTCAGTTTGTTGACCAACTCAGAAGTAGCagaagaagaaaatggactacttcaaaatTGAGAtttcctcaatggcgctgcccatacACTCACAGGTGCCATAATGGGACGGATACATTGCGATCTCTATGGTATCATAATGGGACAgaaaatttttttttttttat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1939785 True 1302 lncRNA 0.41 2 42582357 42592798

Neighbor

gene id symbol gene type direction distance location
LOC118942073 NA coding upstream 55711 42522510 ~ 42527008 (+)
LOC110499605 LOC106590859 coding upstream 71600 42484544 ~ 42511247 (+)
LOC110499602 LOC106589930 coding upstream 163276 42416095 ~ 42419081 (+)
LOC110499494 LOC106589929 coding upstream 169324 42408262 ~ 42413033 (+)
parga LOC106589925 coding upstream 299569 42173980 ~ 42282788 (+)
LOC118942074 NA coding downstream 1206 42594004 ~ 42598619 (+)
LOC110499499 LOC106589923 coding downstream 62959 42655757 ~ 42660010 (+)
LOC110499501 sft2a coding downstream 152366 42745164 ~ 42774109 (+)
LOC118942075 NA coding downstream 210791 42803589 ~ 42827234 (+)
tbxtb LOC106589941 coding downstream 253248 42846046 ~ 42851739 (+)
G1695883 NA non-coding upstream 2442 42579610 ~ 42579915 (+)
G1695880 NA non-coding upstream 3636 42578472 ~ 42578721 (+)
G1695881 NA non-coding upstream 8042 42573210 ~ 42574315 (+)
G1695877 NA non-coding upstream 13461 42567910 ~ 42568896 (+)
G1695870 NA non-coding upstream 23838 42557404 ~ 42558519 (+)
G1695903 LOC106578834 non-coding downstream 18095 42610893 ~ 42611694 (+)
G1695887 NA non-coding downstream 22681 42615479 ~ 42615821 (+)
G1695908 LOC106578834 non-coding downstream 51327 42644125 ~ 42645296 (+)
G1696226 NA non-coding downstream 55008 42647806 ~ 42648449 (+)
G1695272 NA other upstream 963852 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2369404 40211522 ~ 40212953 (+)
G1693700 NA other upstream 2699732 39881958 ~ 39882625 (+)
G1696324 NA other downstream 187201 42779999 ~ 42780549 (+)
G1696541 NA other downstream 540829 43133627 ~ 43134013 (+)
LOC110499564 NA other downstream 544595 43137388 ~ 43148369 (+)
G1696563 NA other downstream 614761 43207559 ~ 43209518 (+)
G1696904 NA other downstream 1030686 43623484 ~ 43626360 (+)

Expression


Co-expression Network