G1696418


Basic Information

Item Value
gene id G1696418
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42854754 ~ 42854980 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940461
ACAAGCTACTGTTCTCAACTGTGGTAGGAATGAGTCTGTCTGCTACACAATCAACCTCTTGCAAATAAGGAATTCACCCCGCTAGTGATGAACTATGCAAAATATTACATTTGAATTTTTACTGCCTCGCTCCAGTCTCTCTGAAGTGTTGACAAAAGAGACGGATTGTTcactgaataaaatataaattgtGTTTTGATTTGGCTCAGCATTACATTTCCCACATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940461 True 227 lncRNA 0.38 1 42854754 42854980

Neighbor

gene id symbol gene type direction distance location
tbxtb LOC106589941 coding upstream 3015 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 27662 42803589 ~ 42827234 (+)
LOC110499501 sft2a coding upstream 80645 42745164 ~ 42774109 (+)
LOC110499499 LOC106589923 coding upstream 194744 42655757 ~ 42660010 (+)
LOC118942074 NA coding upstream 256135 42594004 ~ 42598619 (+)
LOC110499502 pde10a coding downstream 95969 42950949 ~ 43125594 (+)
LOC110499564 NA coding downstream 282408 43137388 ~ 43148369 (+)
LOC110510394 NA coding downstream 516713 43371693 ~ 43402764 (+)
LOC118942021 micu1 coding downstream 593734 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 743107 43552789 ~ 43615700 (+)
G1696409 NA non-coding upstream 12739 42841812 ~ 42842015 (+)
G1696342 NA non-coding upstream 42444 42810796 ~ 42812310 (+)
G1696336 NA non-coding upstream 58154 42796362 ~ 42796600 (+)
G1696330 NA non-coding upstream 64302 42788631 ~ 42790452 (+)
G1696423 NA non-coding downstream 25541 42880521 ~ 42880866 (+)
G1696447 NA non-coding downstream 49287 42904267 ~ 42909912 (+)
G1696448 NA non-coding downstream 61315 42916295 ~ 42916896 (+)
G1696458 NA non-coding downstream 83421 42938401 ~ 42940278 (+)
G1696477 NA non-coding downstream 136244 42991224 ~ 43040351 (+)
G1696324 NA other upstream 74205 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 327746 42522510 ~ 42527008 (+)
LOC110499605 LOC106590859 other upstream 343507 42484544 ~ 42511247 (+)
G1695272 NA other upstream 1236249 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2641801 40211522 ~ 40212953 (+)
G1696541 NA other downstream 278647 43133627 ~ 43134013 (+)
G1696563 NA other downstream 352579 43207559 ~ 43209518 (+)
G1696904 NA other downstream 768504 43623484 ~ 43626360 (+)
G1696905 NA other downstream 771408 43626388 ~ 43661355 (+)

Expression


Co-expression Network