G1696448


Basic Information

Item Value
gene id G1696448
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 42916295 ~ 42916896 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940508
ACCTCTTAGCCACAGTACAGTATGATCACAGACATGgaccctttctctctcagctcattcactgtcaagccactaacacctctgtctgatcacagcTAAATTACGTTgttcctcaaaagaacagacatggaaacaaccacacattcacagcccagtaagctgtacaacatcagacattcatacagacgggcccaaaacagcacagaataaaaaaagaagaaagcaaccattaatttaaaaaatgtccaaacactcttagataactttctggataccacattcactcaatctggcagtacaaaacatcaactatATCCAACCAAAAGCACACagacccaaataatggtgaattacaccttcattactgtgagactttaaaactctataaacgtAACACTCAGAACACTCAGAACCAAAaaaaagcacagtacaacagcaagcagctgccactaattgaggagtccataaacacacacaacttctggcaaaattggaaaaaa

Function

NR:

description
PREDICTED: uncharacterized protein LOC109067500

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940508 True 500 lncRNA 0.39 2 42916295 42916896

Neighbor

gene id symbol gene type direction distance location
tbxtb LOC106589941 coding upstream 64556 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 89203 42803589 ~ 42827234 (+)
LOC110499501 sft2a coding upstream 142186 42745164 ~ 42774109 (+)
LOC110499499 LOC106589923 coding upstream 256285 42655757 ~ 42660010 (+)
LOC118942074 NA coding upstream 317676 42594004 ~ 42598619 (+)
LOC110499502 pde10a coding downstream 34053 42950949 ~ 43125594 (+)
LOC110499564 NA coding downstream 220492 43137388 ~ 43148369 (+)
LOC110510394 NA coding downstream 454797 43371693 ~ 43402764 (+)
LOC118942021 micu1 coding downstream 531818 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 681191 43552789 ~ 43615700 (+)
G1696447 NA non-coding upstream 6383 42904267 ~ 42909912 (+)
G1696423 NA non-coding upstream 35429 42880521 ~ 42880866 (+)
G1696418 NA non-coding upstream 61315 42854754 ~ 42854980 (+)
G1696409 NA non-coding upstream 74280 42841812 ~ 42842015 (+)
G1696458 NA non-coding downstream 21505 42938401 ~ 42940278 (+)
G1696477 NA non-coding downstream 74328 42991224 ~ 43040351 (+)
G1696481 NA non-coding downstream 81149 42998045 ~ 43083597 (+)
G1696484 NA non-coding downstream 85457 43002353 ~ 43002809 (+)
G1696493 NA non-coding downstream 96470 43013366 ~ 43015317 (+)
G1696324 NA other upstream 135746 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 389287 42522510 ~ 42527008 (+)
LOC110499605 LOC106590859 other upstream 405048 42484544 ~ 42511247 (+)
G1695272 NA other upstream 1297790 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2703342 40211522 ~ 40212953 (+)
G1696541 NA other downstream 216731 43133627 ~ 43134013 (+)
G1696563 NA other downstream 290663 43207559 ~ 43209518 (+)
G1696904 NA other downstream 706588 43623484 ~ 43626360 (+)
G1696905 NA other downstream 709492 43626388 ~ 43661355 (+)

Expression


Co-expression Network