Gene
RNA
| Item | Value |
|---|---|
| gene id | G1696458 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 42938401 ~ 42940278 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1940522 | False | 338 | lncRNA | 0.45 | 2 | 42938401 | 42939574 |
| TU1940521 | True | 382 | lncRNA | 0.45 | 2 | 42939281 | 42940278 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tbxtb | LOC106589941 | coding | upstream | 86662 | 42846046 ~ 42851739 (+) |
| LOC118942075 | NA | coding | upstream | 111309 | 42803589 ~ 42827234 (+) |
| LOC110499501 | sft2a | coding | upstream | 164292 | 42745164 ~ 42774109 (+) |
| LOC110499499 | LOC106589923 | coding | upstream | 278391 | 42655757 ~ 42660010 (+) |
| LOC118942074 | NA | coding | upstream | 339782 | 42594004 ~ 42598619 (+) |
| LOC110499502 | pde10a | coding | downstream | 10671 | 42950949 ~ 43125594 (+) |
| LOC110499564 | NA | coding | downstream | 197110 | 43137388 ~ 43148369 (+) |
| LOC110510394 | NA | coding | downstream | 431415 | 43371693 ~ 43402764 (+) |
| LOC118942021 | micu1 | coding | downstream | 508436 | 43448714 ~ 43494181 (+) |
| LOC110499505 | LOC106589952 | coding | downstream | 657809 | 43552789 ~ 43615700 (+) |
| G1696448 | NA | non-coding | upstream | 21505 | 42916295 ~ 42916896 (+) |
| G1696447 | NA | non-coding | upstream | 28489 | 42904267 ~ 42909912 (+) |
| G1696423 | NA | non-coding | upstream | 57535 | 42880521 ~ 42880866 (+) |
| G1696418 | NA | non-coding | upstream | 83421 | 42854754 ~ 42854980 (+) |
| G1696409 | NA | non-coding | upstream | 96386 | 42841812 ~ 42842015 (+) |
| G1696477 | NA | non-coding | downstream | 50946 | 42991224 ~ 43040351 (+) |
| G1696481 | NA | non-coding | downstream | 57767 | 42998045 ~ 43083597 (+) |
| G1696484 | NA | non-coding | downstream | 62075 | 43002353 ~ 43002809 (+) |
| G1696493 | NA | non-coding | downstream | 73088 | 43013366 ~ 43015317 (+) |
| G1696503 | NA | non-coding | downstream | 103899 | 43044177 ~ 43044547 (+) |
| G1696324 | NA | other | upstream | 157852 | 42779999 ~ 42780549 (+) |
| LOC118942073 | NA | other | upstream | 411393 | 42522510 ~ 42527008 (+) |
| LOC110499605 | LOC106590859 | other | upstream | 427154 | 42484544 ~ 42511247 (+) |
| G1695272 | NA | other | upstream | 1319896 | 41618027 ~ 41618505 (+) |
| G1693914 | NA | other | upstream | 2725448 | 40211522 ~ 40212953 (+) |
| G1696541 | NA | other | downstream | 193349 | 43133627 ~ 43134013 (+) |
| G1696563 | NA | other | downstream | 267281 | 43207559 ~ 43209518 (+) |
| G1696904 | NA | other | downstream | 683206 | 43623484 ~ 43626360 (+) |
| G1696905 | NA | other | downstream | 686110 | 43626388 ~ 43661355 (+) |
