G1696493


Basic Information

Item Value
gene id G1696493
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43013366 ~ 43015317 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940571
aaCTTAGGAGCACCACATTAAACTTAGGAGCACCACATTAAACTTAGGAGCACCACATCAAacttggagggaggagaggttttCCCTATTTGCACAGTGCTCCTAAAATAAAACTCATGGTCTCACAGCTAAATATTTTGCTGCATATGTCTGTTAGACTGGTGCCCActaggtagactggtagactggtacccactaggtagactggtagactggtccCCActaggtagactggtagactggtacccactaggtagactggtagactggtaccCATTAGgtagactggtagactggtagactggtaccCACTAGgtagactggtagactggtaccCACTAGGTAGACTGGTAGATTGGTACCCACTAGGT

Function

NR:

description
Zinc finger protein 208

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940571 True 371 lncRNA 0.47 3 43013366 43015317

Neighbor

gene id symbol gene type direction distance location
tbxtb LOC106589941 coding upstream 161627 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 186274 42803589 ~ 42827234 (+)
LOC110499501 sft2a coding upstream 239257 42745164 ~ 42774109 (+)
LOC110499499 LOC106589923 coding upstream 353356 42655757 ~ 42660010 (+)
LOC118942074 NA coding upstream 414747 42594004 ~ 42598619 (+)
LOC110499564 NA coding downstream 122071 43137388 ~ 43148369 (+)
LOC110510394 NA coding downstream 356376 43371693 ~ 43402764 (+)
LOC118942021 micu1 coding downstream 433397 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 582770 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 961963 43977280 ~ 43987101 (+)
G1696484 NA non-coding upstream 10557 43002353 ~ 43002809 (+)
G1696458 NA non-coding upstream 73088 42938401 ~ 42940278 (+)
G1696448 NA non-coding upstream 96470 42916295 ~ 42916896 (+)
G1696447 NA non-coding upstream 103454 42904267 ~ 42909912 (+)
G1696423 NA non-coding upstream 132500 42880521 ~ 42880866 (+)
G1696503 NA non-coding downstream 28860 43044177 ~ 43044547 (+)
G1696514 NA non-coding downstream 57673 43072990 ~ 43073285 (+)
G1696520 NA non-coding downstream 71240 43086557 ~ 43091433 (+)
G1696526 NA non-coding downstream 85206 43100523 ~ 43106675 (+)
G1696528 NA non-coding downstream 91436 43106753 ~ 43109841 (+)
G1696324 NA other upstream 232817 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 486358 42522510 ~ 42527008 (+)
LOC110499605 LOC106590859 other upstream 502119 42484544 ~ 42511247 (+)
G1695272 NA other upstream 1394861 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2800413 40211522 ~ 40212953 (+)
G1696541 NA other downstream 118310 43133627 ~ 43134013 (+)
G1696563 NA other downstream 192242 43207559 ~ 43209518 (+)
G1696904 NA other downstream 608167 43623484 ~ 43626360 (+)
G1696905 NA other downstream 611071 43626388 ~ 43661355 (+)

Expression


Co-expression Network