G1696520


Basic Information

Item Value
gene id G1696520
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43086557 ~ 43091433 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940605
atgtttgctgcaaccttgtcctgtcctgtcggaatctgccggtccatctgagcctacctatgttttgttattaaagaagttctgtttacgttaattcgcttttgggtcctcattcacgcaccgtaacaaagaTAAATTAACTTAGTCATATATACCCATAGACTCTAAGATAAATTAACTTAGTCATACATACCCATAGATTCTACAATATAAATTAACTTAGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940605 True 226 lncRNA 0.36 2 43086557 43091433

Neighbor

gene id symbol gene type direction distance location
tbxtb LOC106589941 coding upstream 234818 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 259465 42803589 ~ 42827234 (+)
LOC110499501 sft2a coding upstream 312448 42745164 ~ 42774109 (+)
LOC110499499 LOC106589923 coding upstream 426547 42655757 ~ 42660010 (+)
LOC118942074 NA coding upstream 487938 42594004 ~ 42598619 (+)
LOC110499564 NA coding downstream 45955 43137388 ~ 43148369 (+)
LOC110510394 NA coding downstream 280260 43371693 ~ 43402764 (+)
LOC118942021 micu1 coding downstream 357281 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 506654 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 885847 43977280 ~ 43987101 (+)
G1696481 NA non-coding upstream 2960 42998045 ~ 43083597 (+)
G1696514 NA non-coding upstream 13272 43072990 ~ 43073285 (+)
G1696503 NA non-coding upstream 42010 43044177 ~ 43044547 (+)
G1696477 NA non-coding upstream 46206 42991224 ~ 43040351 (+)
G1696493 NA non-coding upstream 71240 43013366 ~ 43015317 (+)
G1696526 NA non-coding downstream 9090 43100523 ~ 43106675 (+)
G1696528 NA non-coding downstream 15320 43106753 ~ 43109841 (+)
G1696529 NA non-coding downstream 16216 43107649 ~ 43111069 (+)
LOC110499502 pde10a non-coding downstream 29535 42950949 ~ 43125594 (+)
G1696432 NA non-coding downstream 34274 43125707 ~ 43128000 (+)
G1696324 NA other upstream 306008 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 559549 42522510 ~ 42527008 (+)
LOC110499605 LOC106590859 other upstream 575310 42484544 ~ 42511247 (+)
G1695272 NA other upstream 1468052 41618027 ~ 41618505 (+)
G1693914 NA other upstream 2873604 40211522 ~ 40212953 (+)
G1696541 NA other downstream 42194 43133627 ~ 43134013 (+)
G1696563 NA other downstream 116126 43207559 ~ 43209518 (+)
G1696904 NA other downstream 532051 43623484 ~ 43626360 (+)
G1696905 NA other downstream 534955 43626388 ~ 43661355 (+)

Expression


Co-expression Network