Gene
RNA
| Item | Value |
|---|---|
| gene id | G1696714 |
| gene name | NA |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 43130200 ~ 43131698 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110517325 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1940837 | False | 1004 | lncRNA | 0.41 | 2 | 43130200 | 43131698 |
| TU1940841 | False | 968 | lncRNA | 0.40 | 3 | 43130200 | 43131698 |
| TU1940836 | False | 1197 | TUCP | 0.36 | 2 | 43130446 | 43131698 |
| TU1940840 | True | 1217 | TUCP | 0.37 | 2 | 43130446 | 43131698 |
43,129,200
43,129,600
43,130,000
43,130,400
43,130,800
43,131,200
43,131,600
43,132,000
43,132,400
43,132,800
43,133,200
43,133,600
43,134,000
43,134,400
43,134,800
43,135,200
43,135,600
43,136,000
NC_048584.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499563 | LOC106589940 | coding | downstream | 396908 | 42683879 ~ 42733292 (-) |
| LOC110499498 | LOC106578834 | coding | downstream | 484941 | 42597760 ~ 42645259 (-) |
| LOC110499497 | NA | coding | downstream | 541201 | 42587728 ~ 42588999 (-) |
| cisd1 | LOC106589936 | coding | downstream | 543161 | 42582333 ~ 42587039 (-) |
| LOC110499495 | LOC106589924 | coding | downstream | 551495 | 42573806 ~ 42578705 (-) |
| LOC110518228 | mcu | coding | upstream | 63136 | 43194834 ~ 43305004 (-) |
| LOC110499507 | LOC106589953 | coding | upstream | 426709 | 43558407 ~ 43586489 (-) |
| LOC110492809 | unc5b | coding | upstream | 498303 | 43630001 ~ 43803224 (-) |
| LOC118942076 | NA | coding | upstream | 673800 | 43805498 ~ 43807349 (-) |
| tbata | LOC106577277 | coding | upstream | 822985 | 43954683 ~ 43966333 (-) |
| G1696691 | NA | non-coding | downstream | 410 | 43128909 ~ 43129790 (-) |
| G1696712 | LOC106589947 | non-coding | downstream | 9249 | 43117809 ~ 43120951 (-) |
| G1696698 | NA | non-coding | downstream | 14272 | 43115509 ~ 43115928 (-) |
| G1696700 | NA | non-coding | downstream | 28900 | 43099896 ~ 43101300 (-) |
| G1696699 | NA | non-coding | downstream | 29417 | 43098946 ~ 43100783 (-) |
| G1696726 | NA | non-coding | upstream | 16485 | 43148183 ~ 43150411 (-) |
| G1696728 | NA | non-coding | upstream | 21519 | 43153217 ~ 43156076 (-) |
| G1696730 | NA | non-coding | upstream | 28408 | 43160106 ~ 43167208 (-) |
| G1696731 | NA | non-coding | upstream | 41210 | 43172908 ~ 43173264 (-) |
| G1696732 | NA | non-coding | upstream | 43253 | 43174951 ~ 43175276 (-) |
| G1696673 | NA | other | downstream | 80837 | 43047738 ~ 43049363 (-) |
| G1696606 | NA | other | downstream | 247408 | 42882169 ~ 42882792 (-) |
| G1696403 | NA | other | downstream | 302965 | 42826595 ~ 42827235 (-) |
| G1697017 | NA | other | upstream | 369727 | 43501425 ~ 43502041 (-) |
| G1697090 | NA | other | upstream | 609609 | 43741307 ~ 43741664 (-) |
| G1697091 | NA | other | upstream | 613097 | 43744795 ~ 43745102 (-) |
| G1697093 | NA | other | upstream | 614801 | 43746499 ~ 43747178 (-) |
