G1696553


Basic Information

Item Value
gene id G1696553
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43171463 ~ 43172287 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940651
tatcctctctaacctctctaactctaatcctctctaacctcgctaactctaatcctctctaacctctctaactctatatcccctctaacctcactaactctatatcctctctaacccctctaactctatatcctctctaacctctctaactctaatcctctctaacctctctaactctaatcctctctaactctaatcctctctaacccctctaacctctctaactctaatcctctctaacctctaaacTCTAAtcccctctaacctctctaactctaacctctctaactctaacctctctaactctaatcctctctaactctaacctctctaactctaatcctctctaacctctaactctaatcctctctaacccctctaacctctctaactctaatcctctctaacccctctaacctctctaactctaatcctctctaactctaatcctctctaacctctctaactctatatcctctctaacctctctaactctaatcctctctaacctctctaactctaatcctctctaacctctctaactctaatcctctctaacctctctaactctaatcctctctaacctctctaactctaatcctctctaacctctctacctctatatcctctctaacccctctaactctatatcctctctaacctctctacctctatatcctctctaacccctctaactctatatcctctctaacctctctaactctaatcctctctaacctctctaactctatatcccctctaacctctctaactctaatcctctctaacctctctaactctaatcctctctaacctctctaactc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940651 True 825 lncRNA 0.41 1 43171463 43172287

Neighbor

gene id symbol gene type direction distance location
LOC110499564 NA coding upstream 23094 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 49568 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 319724 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 344371 42803589 ~ 42827234 (+)
LOC110499501 sft2a coding upstream 397354 42745164 ~ 42774109 (+)
LOC110510394 NA coding downstream 199406 43371693 ~ 43402764 (+)
LOC118942021 micu1 coding downstream 276427 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 425800 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 804993 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 851732 44024019 ~ 44028357 (+)
G1696549 NA non-coding upstream 13329 43157813 ~ 43158134 (+)
G1696431 NA non-coding upstream 15555 43150604 ~ 43155908 (+)
G1696542 NA non-coding upstream 36769 43134161 ~ 43134694 (+)
G1696432 NA non-coding upstream 43463 43125707 ~ 43128000 (+)
G1696554 NA non-coding downstream 153 43172440 ~ 43172684 (+)
G1696559 NA non-coding downstream 26122 43198409 ~ 43225842 (+)
G1696566 NA non-coding downstream 42656 43214943 ~ 43217189 (+)
G1696576 NA non-coding downstream 74875 43247162 ~ 43247558 (+)
G1696579 NA non-coding downstream 78836 43251123 ~ 43253120 (+)
G1696541 NA other upstream 37450 43133627 ~ 43134013 (+)
G1696324 NA other upstream 390914 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 644455 42522510 ~ 42527008 (+)
LOC110499605 LOC106590859 other upstream 660216 42484544 ~ 42511247 (+)
G1696563 NA other downstream 35272 43207559 ~ 43209518 (+)
G1696904 NA other downstream 451197 43623484 ~ 43626360 (+)
G1696905 NA other downstream 454101 43626388 ~ 43661355 (+)
G1696916 NA other downstream 497277 43669564 ~ 43670353 (+)
G1697152 NA other downstream 694942 43867229 ~ 43908497 (+)

Expression


Co-expression Network