G1696579


Basic Information

Item Value
gene id G1696579
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43251123 ~ 43253120 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940682
CTCCAGTGGCAGTTTAGATTCAATCGCCAAACTACATTTACATTAGATTTTACAACAAGATTTTATCTTGGTTTTAAATCAAACGTAAACTTAGTTTAGATGAAGGATTCAATTTAACTAGGATTTAAATTTAAAACTAAGTTTATAGATACAACTTTAAATTTAAGAGTTAATCCATATTGGTGCAACCCACCCCATCCCTCTTAGAAACACACAACCCACCCCATC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940682 True 228 lncRNA 0.32 2 43251123 43253120

Neighbor

gene id symbol gene type direction distance location
LOC110499564 NA coding upstream 102754 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 129228 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 399384 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 424031 42803589 ~ 42827234 (+)
LOC110499501 sft2a coding upstream 477014 42745164 ~ 42774109 (+)
LOC110510394 NA coding downstream 118573 43371693 ~ 43402764 (+)
LOC118942021 micu1 coding downstream 195594 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 344967 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 724160 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 770899 44024019 ~ 44028357 (+)
G1696576 NA non-coding upstream 3565 43247162 ~ 43247558 (+)
G1696559 NA non-coding upstream 25281 43198409 ~ 43225842 (+)
G1696566 NA non-coding upstream 33934 43214943 ~ 43217189 (+)
G1696554 NA non-coding upstream 78439 43172440 ~ 43172684 (+)
G1696553 NA non-coding upstream 78836 43171463 ~ 43172287 (+)
G1696796 NA non-coding downstream 93674 43346794 ~ 43347101 (+)
G1696798 NA non-coding downstream 94007 43347127 ~ 43347398 (+)
G1696804 NA non-coding downstream 96995 43350115 ~ 43351243 (+)
G1696807 NA non-coding downstream 101163 43354283 ~ 43354517 (+)
G1696816 NA non-coding downstream 115110 43368230 ~ 43369042 (+)
G1696563 NA other upstream 41605 43207559 ~ 43209518 (+)
G1696541 NA other upstream 117110 43133627 ~ 43134013 (+)
G1696324 NA other upstream 470574 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 724115 42522510 ~ 42527008 (+)
G1696904 NA other downstream 370364 43623484 ~ 43626360 (+)
G1696905 NA other downstream 373268 43626388 ~ 43661355 (+)
G1696916 NA other downstream 416444 43669564 ~ 43670353 (+)
G1697152 NA other downstream 614109 43867229 ~ 43908497 (+)
G1697222 NA other downstream 978202 44231322 ~ 44231767 (+)

Expression


Co-expression Network