G1696804


Basic Information

Item Value
gene id G1696804
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43350115 ~ 43351243 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1940956
TACTATGTAGGGGatagcagtagtgcactatgtaggggatagcagtagtgtactatgtaggggatagcAGTAGTGTCCTATGTAGGGGatagcagtagtgcactatgtaggggatagcagtagtgtactatgtagtggatagcagtagtgcactatgtaggggacagcagtagtgcactatgtaggggacagcagtagtgcactatgtaggggacagcagtagtgcactatgtaggggatagcagtagtgcactatgtaggggacagcagtagtgtactatgtaggggacagcagtagtgtactatgtagtggatagcagtagtgcactatgtaggggacagcagtagtgcactatgtaggggacagcagtagtgcactatgtaggggacagCAGTAGTGCCCTACATTGCCATTTGGGAGAACCATAGGCGTACTCTCTGTAGCTCCATTCTGTAGAATGGGCACAAGCAAATAGCCTACacttaaaggttaaatatatatatatattttttatagcaCATACAGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1940956 True 529 lncRNA 0.46 3 43350115 43351243

Neighbor

gene id symbol gene type direction distance location
LOC110499564 NA coding upstream 201746 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 228220 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 498376 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 523023 42803589 ~ 42827234 (+)
LOC110499501 sft2a coding upstream 576006 42745164 ~ 42774109 (+)
LOC110510394 NA coding downstream 20450 43371693 ~ 43402764 (+)
LOC118942021 micu1 coding downstream 97471 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 246844 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 626037 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 672776 44024019 ~ 44028357 (+)
G1696798 NA non-coding upstream 2717 43347127 ~ 43347398 (+)
G1696796 NA non-coding upstream 3014 43346794 ~ 43347101 (+)
G1696579 NA non-coding upstream 96995 43251123 ~ 43253120 (+)
G1696576 NA non-coding upstream 102557 43247162 ~ 43247558 (+)
G1696559 NA non-coding upstream 124273 43198409 ~ 43225842 (+)
G1696807 NA non-coding downstream 3040 43354283 ~ 43354517 (+)
G1696816 NA non-coding downstream 16987 43368230 ~ 43369042 (+)
G1696818 NA non-coding downstream 19521 43370764 ~ 43370984 (+)
G1696828 NA non-coding downstream 26865 43378108 ~ 43378363 (+)
G1696831 NA non-coding downstream 35492 43386735 ~ 43387185 (+)
G1696563 NA other upstream 140597 43207559 ~ 43209518 (+)
G1696541 NA other upstream 216102 43133627 ~ 43134013 (+)
G1696324 NA other upstream 569566 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 823107 42522510 ~ 42527008 (+)
G1696904 NA other downstream 272241 43623484 ~ 43626360 (+)
G1696905 NA other downstream 275145 43626388 ~ 43661355 (+)
G1696916 NA other downstream 318321 43669564 ~ 43670353 (+)
G1697152 NA other downstream 515986 43867229 ~ 43908497 (+)
G1697222 NA other downstream 880079 44231322 ~ 44231767 (+)

Expression


Co-expression Network