G1696847


Basic Information

Item Value
gene id G1696847
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43420478 ~ 43421746 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941031
actgttaacactgaggtggtgtgtcctagtaggaagaccactgttaacactgaggtggtgtgtcctataggaagaccactgttaacactgaggtggtgtgtcctataggaagaccactgttaacactgaggaggtgtgtcctataggaagaccactgttaacactgaggtggtgtgtcctagtaggaagaccactgttaacactgagtaggtgtgtcctagtaggaagaccactgttaacactgaggtggtgtgtcctagtagga
>TU1941030
acactgaggaggtgtgtcctagtaggaagaccactgttaacactgaggtggtgtgtcctataggaagaccactgttaacactgaggtggtgtgtcctataggaagaccactgttaacactgaggtggtgtgtcccagtaggaagaccactgttagcactgaggtggtgtgtcctataggaagaccactgttaacactgaggtggtgtgtcccagtaggaagaccactgaggtggtgtgtcctagtaggaagaccactgttagcactgaggtggtgtgtcctatag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941031 False 265 lncRNA 0.48 3 43420478 43421253
TU1941030 True 285 lncRNA 0.50 2 43421188 43421746

Neighbor

gene id symbol gene type direction distance location
LOC110510394 NA coding upstream 17714 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 272109 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 298583 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 568739 42846046 ~ 42851739 (+)
LOC118942075 NA coding upstream 593386 42803589 ~ 42827234 (+)
LOC118942021 micu1 coding downstream 26968 43448714 ~ 43494181 (+)
LOC110499505 LOC106589952 coding downstream 176341 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 555534 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 602273 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 612742 44034488 ~ 44055611 (+)
G1696846 NA non-coding upstream 121 43420156 ~ 43420357 (+)
G1696845 NA non-coding upstream 915 43419322 ~ 43419563 (+)
G1696832 NA non-coding upstream 32907 43387257 ~ 43387571 (+)
G1696831 NA non-coding upstream 33293 43386735 ~ 43387185 (+)
G1696828 NA non-coding upstream 42115 43378108 ~ 43378363 (+)
G1696851 NA non-coding downstream 6920 43428666 ~ 43428933 (+)
G1696861 NA non-coding downstream 39032 43460778 ~ 43461000 (+)
G1696865 NA non-coding downstream 53418 43475164 ~ 43475511 (+)
G1696867 NA non-coding downstream 62927 43484673 ~ 43484902 (+)
G1696868 NA non-coding downstream 63351 43485097 ~ 43485426 (+)
G1696563 NA other upstream 210960 43207559 ~ 43209518 (+)
G1696541 NA other upstream 286465 43133627 ~ 43134013 (+)
G1696324 NA other upstream 639929 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 893470 42522510 ~ 42527008 (+)
G1696904 NA other downstream 201738 43623484 ~ 43626360 (+)
G1696905 NA other downstream 204642 43626388 ~ 43661355 (+)
G1696916 NA other downstream 247818 43669564 ~ 43670353 (+)
G1697152 NA other downstream 445483 43867229 ~ 43908497 (+)
G1697222 NA other downstream 809576 44231322 ~ 44231767 (+)

Expression


Co-expression Network