G1696823


Basic Information

Item Value
gene id G1696823
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43537157 ~ 43551194 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941005
atattataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatcgacctggtctgtcataatataatagagacagtagatctagctggtctgtcatattataatagcgacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatgtagctggtctgtcaaaatataatagagacagtagatgtagctggtctgtcaaaatataatagagacagtagatctagctggtctgtcactatataatagtgacagtagatttagctagtctgtcatattataatagagacagtagatctagctggtctggcataatataatagagacagtagatctagctggtctgtcataatataaaagagacagtagacctagctggtctgtcatattataatagcgacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagacctagctggtctgtcataatataatagagacagtagatctagctggtctgtcatattataatagcgacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataacagagacagtagatctagcgggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatctagctggtctgtcataatataatagagacagtagatgtagctggtctgtcataatataatagcgacagtagacctagctggtctgtcataatata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941005 True 1044 lncRNA 0.36 2 43537157 43551194

Neighbor

gene id symbol gene type direction distance location
LOC118942021 micu1 coding upstream 42976 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 134393 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 388788 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 415262 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 685418 42846046 ~ 42851739 (+)
LOC110499505 LOC106589952 coding downstream 46893 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 426086 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 472825 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 483294 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 540206 44091400 ~ 44134903 (+)
G1696871 NA non-coding upstream 40057 43496133 ~ 43497100 (+)
G1696870 NA non-coding upstream 44585 43492364 ~ 43492572 (+)
G1696869 NA non-coding upstream 46802 43487901 ~ 43490355 (+)
G1696868 NA non-coding upstream 51731 43485097 ~ 43485426 (+)
G1696867 NA non-coding upstream 52255 43484673 ~ 43484902 (+)
G1696876 NA non-coding downstream 2536 43553730 ~ 43554070 (+)
G1696879 NA non-coding downstream 11386 43562580 ~ 43562865 (+)
G1696882 NA non-coding downstream 18458 43569652 ~ 43570811 (+)
G1696892 NA non-coding downstream 33135 43584329 ~ 43584795 (+)
G1696563 NA other upstream 327639 43207559 ~ 43209518 (+)
G1696541 NA other upstream 403144 43133627 ~ 43134013 (+)
G1696324 NA other upstream 756608 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 1010149 42522510 ~ 42527008 (+)
G1696904 NA other downstream 72290 43623484 ~ 43626360 (+)
G1696905 NA other downstream 75194 43626388 ~ 43661355 (+)
G1696916 NA other downstream 118370 43669564 ~ 43670353 (+)
G1697152 NA other downstream 316035 43867229 ~ 43908497 (+)
G1697222 NA other downstream 680128 44231322 ~ 44231767 (+)

Expression


Co-expression Network