G1696879


Basic Information

Item Value
gene id G1696879
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43562580 ~ 43562865 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941085
CAGTAAGGCTGAGTGGGCAGGGAAATGCTAATTCTCTAACTATCAGTAAGGCTGAGTGGGCAGGGAAATGCTAATTCTCTATCAGTAAGGCTGAGTGGGCAGGGAAATGCTAATTCTCTATCAGTAAGGCTGAGTGGGCAGGGAAATGCTAATTCTCTATCAGTAAGGCTGAGTGGGCAGGGAAATGCTAATTCTCTATCAGTAAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941085 True 208 lncRNA 0.46 2 43562580 43562865

Neighbor

gene id symbol gene type direction distance location
LOC118942021 micu1 coding upstream 68399 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 159816 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 414211 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 440685 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 710841 42846046 ~ 42851739 (+)
LOC110499505 LOC106589952 coding downstream 35222 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 414415 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 461154 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 471623 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 528535 44091400 ~ 44134903 (+)
G1696876 NA non-coding upstream 8510 43553730 ~ 43554070 (+)
G1696823 NA non-coding upstream 11386 43537157 ~ 43551194 (+)
G1696871 NA non-coding upstream 65480 43496133 ~ 43497100 (+)
G1696870 NA non-coding upstream 70008 43492364 ~ 43492572 (+)
G1696869 NA non-coding upstream 72225 43487901 ~ 43490355 (+)
G1696882 NA non-coding downstream 6787 43569652 ~ 43570811 (+)
G1696892 NA non-coding downstream 21464 43584329 ~ 43584795 (+)
G1696899 NA non-coding downstream 49003 43611868 ~ 43612229 (+)
G1696903 NA non-coding downstream 58335 43621200 ~ 43621692 (+)
G1696909 NA non-coding downstream 70444 43633309 ~ 43633743 (+)
G1696563 NA other upstream 353062 43207559 ~ 43209518 (+)
G1696541 NA other upstream 428567 43133627 ~ 43134013 (+)
G1696324 NA other upstream 782031 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 1035572 42522510 ~ 42527008 (+)
G1696904 NA other downstream 60619 43623484 ~ 43626360 (+)
G1696905 NA other downstream 63523 43626388 ~ 43661355 (+)
G1696916 NA other downstream 106699 43669564 ~ 43670353 (+)
G1697152 NA other downstream 304364 43867229 ~ 43908497 (+)
G1697222 NA other downstream 668457 44231322 ~ 44231767 (+)

Expression


Co-expression Network