G1696892


Basic Information

Item Value
gene id G1696892
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43584329 ~ 43584795 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941104
aTTCTCATTCTCCCCTTTAGGTTTcctgtgtattaggtagttgttggggaaatgttagattacttgttagatattactgcactgtcggaactagaagcacaagcatttcactacactcgcattaacatctgctaaccatgtgtatgtgaccattaacatctgctaaccatgtgtatgtgaccattaacatctgctaaccatgtgtatgtgaccattaacatctgctaaccatgtgtatgtgaccagtaacatctgctaaccatgtgtatgtgaccattaacatctgctaaccatgtgtatgtgaccaataaaattggatttgatgtaGAAAATCCACTGTAGGCTCCAGTCAGAGACGGCAGAAGGATTTTATG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941104 True 374 lncRNA 0.39 2 43584329 43584795

Neighbor

gene id symbol gene type direction distance location
LOC118942021 micu1 coding upstream 90148 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 181565 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 435960 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 462434 42950949 ~ 43125594 (+)
tbxtb LOC106589941 coding upstream 732590 42846046 ~ 42851739 (+)
LOC110499505 LOC106589952 coding downstream 13292 43552789 ~ 43615700 (+)
LOC110499517 LOC106589992 coding downstream 392485 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 439224 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 449693 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 506605 44091400 ~ 44134903 (+)
G1696882 NA non-coding upstream 13518 43569652 ~ 43570811 (+)
G1696879 NA non-coding upstream 21464 43562580 ~ 43562865 (+)
G1696876 NA non-coding upstream 30259 43553730 ~ 43554070 (+)
G1696823 NA non-coding upstream 33135 43537157 ~ 43551194 (+)
G1696871 NA non-coding upstream 87229 43496133 ~ 43497100 (+)
G1696899 NA non-coding downstream 27073 43611868 ~ 43612229 (+)
G1696903 NA non-coding downstream 36405 43621200 ~ 43621692 (+)
G1696909 NA non-coding downstream 48514 43633309 ~ 43633743 (+)
G1696913 NA non-coding downstream 80649 43665444 ~ 43665678 (+)
G1696914 NA non-coding downstream 81307 43666102 ~ 43712664 (+)
G1696563 NA other upstream 374811 43207559 ~ 43209518 (+)
G1696541 NA other upstream 450316 43133627 ~ 43134013 (+)
G1696324 NA other upstream 803780 42779999 ~ 42780549 (+)
LOC118942073 NA other upstream 1057321 42522510 ~ 42527008 (+)
G1696904 NA other downstream 38689 43623484 ~ 43626360 (+)
G1696905 NA other downstream 41593 43626388 ~ 43661355 (+)
G1696916 NA other downstream 84769 43669564 ~ 43670353 (+)
G1697152 NA other downstream 282434 43867229 ~ 43908497 (+)
G1697222 NA other downstream 646527 44231322 ~ 44231767 (+)

Expression


Co-expression Network