Gene
RNA
| Item | Value |
|---|---|
| gene id | G1696903 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 43621200 ~ 43621692 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1941115 | True | 419 | lncRNA | 0.43 | 2 | 43621200 | 43621692 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499505 | LOC106589952 | coding | upstream | 5502 | 43552789 ~ 43615700 (+) |
| LOC118942021 | micu1 | coding | upstream | 127019 | 43448714 ~ 43494181 (+) |
| LOC110510394 | NA | coding | upstream | 218436 | 43371693 ~ 43402764 (+) |
| LOC110499564 | NA | coding | upstream | 472831 | 43137388 ~ 43148369 (+) |
| LOC110499502 | pde10a | coding | upstream | 499305 | 42950949 ~ 43125594 (+) |
| LOC110499517 | LOC106589992 | coding | downstream | 355588 | 43977280 ~ 43987101 (+) |
| LOC110499607 | NA | coding | downstream | 402327 | 44024019 ~ 44028357 (+) |
| LOC110499515 | LOC106589989 | coding | downstream | 412796 | 44034488 ~ 44055611 (+) |
| capn2 | LOC106589959 | coding | downstream | 469708 | 44091400 ~ 44134903 (+) |
| LOC110499567 | LOC106589958 | coding | downstream | 513317 | 44135009 ~ 44181809 (+) |
| G1696899 | NA | non-coding | upstream | 8971 | 43611868 ~ 43612229 (+) |
| G1696892 | NA | non-coding | upstream | 36405 | 43584329 ~ 43584795 (+) |
| G1696882 | NA | non-coding | upstream | 50389 | 43569652 ~ 43570811 (+) |
| G1696879 | NA | non-coding | upstream | 58335 | 43562580 ~ 43562865 (+) |
| G1696909 | NA | non-coding | downstream | 11617 | 43633309 ~ 43633743 (+) |
| G1696913 | NA | non-coding | downstream | 43752 | 43665444 ~ 43665678 (+) |
| G1696914 | NA | non-coding | downstream | 44410 | 43666102 ~ 43712664 (+) |
| G1696923 | NA | non-coding | downstream | 84571 | 43706263 ~ 43706633 (+) |
| G1696927 | NA | non-coding | downstream | 94735 | 43716427 ~ 43716719 (+) |
| G1696563 | NA | other | upstream | 411682 | 43207559 ~ 43209518 (+) |
| G1696541 | NA | other | upstream | 487187 | 43133627 ~ 43134013 (+) |
| G1696324 | NA | other | upstream | 840651 | 42779999 ~ 42780549 (+) |
| LOC118942073 | NA | other | upstream | 1094192 | 42522510 ~ 42527008 (+) |
| G1696904 | NA | other | downstream | 1792 | 43623484 ~ 43626360 (+) |
| G1696905 | NA | other | downstream | 4696 | 43626388 ~ 43661355 (+) |
| G1696916 | NA | other | downstream | 47872 | 43669564 ~ 43670353 (+) |
| G1697152 | NA | other | downstream | 245537 | 43867229 ~ 43908497 (+) |
| G1697222 | NA | other | downstream | 609630 | 44231322 ~ 44231767 (+) |
