G1696909


Basic Information

Item Value
gene id G1696909
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43633309 ~ 43633743 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941129
caaataccttattattatctatcctgatgtctagtcactttaccctgtcttcatgtacatatctacctcaaataccttattattatctatcctgatgtctagtcactttgccctgccttcatgtacatatctacctcaaataccttattattatctatcctgatgtctagtcactttaccctgccttcatgtacatatctacctcaaatacctcattattatctatcctgatgcctagtcactttaccctgccttcatgtacatatctacctcaaataccttattatctatcctgatgcctagtcactttaccctgccttcat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941129 True 323 lncRNA 0.37 2 43633309 43633743

Neighbor

gene id symbol gene type direction distance location
LOC110499505 LOC106589952 coding upstream 17611 43552789 ~ 43615700 (+)
LOC118942021 micu1 coding upstream 139128 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 230545 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 484940 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 511414 42950949 ~ 43125594 (+)
LOC110499517 LOC106589992 coding downstream 343537 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 390276 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 400745 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 457657 44091400 ~ 44134903 (+)
LOC110499567 LOC106589958 coding downstream 501266 44135009 ~ 44181809 (+)
G1696903 NA non-coding upstream 11617 43621200 ~ 43621692 (+)
G1696899 NA non-coding upstream 21080 43611868 ~ 43612229 (+)
G1696892 NA non-coding upstream 48514 43584329 ~ 43584795 (+)
G1696882 NA non-coding upstream 62498 43569652 ~ 43570811 (+)
G1696913 NA non-coding downstream 31701 43665444 ~ 43665678 (+)
G1696914 NA non-coding downstream 32359 43666102 ~ 43712664 (+)
G1696923 NA non-coding downstream 72520 43706263 ~ 43706633 (+)
G1696927 NA non-coding downstream 82684 43716427 ~ 43716719 (+)
G1696931 NA non-coding downstream 95681 43729424 ~ 43729739 (+)
G1696904 NA other upstream 6949 43623484 ~ 43626360 (+)
G1696563 NA other upstream 423791 43207559 ~ 43209518 (+)
G1696541 NA other upstream 499296 43133627 ~ 43134013 (+)
G1696324 NA other upstream 852760 42779999 ~ 42780549 (+)
G1696916 NA other downstream 35821 43669564 ~ 43670353 (+)
G1697152 NA other downstream 233486 43867229 ~ 43908497 (+)
G1697222 NA other downstream 597579 44231322 ~ 44231767 (+)
G1697374 NA other downstream 864917 44498660 ~ 44499846 (+)
LOC110499568 LOC106589976 other downstream 1253324 44885773 ~ 44922697 (+)

Expression


Co-expression Network