Gene
RNA
| Item | Value |
|---|---|
| gene id | G1697080 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 43726060 ~ 43726398 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| Transposable element Tcb1 transposase, partial |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1941424 | True | 339 | lncRNA | 0.47 | 1 | 43726060 | 43726398 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499507 | LOC106589953 | coding | downstream | 139571 | 43558407 ~ 43586489 (-) |
| LOC110518228 | mcu | coding | downstream | 421056 | 43194834 ~ 43305004 (-) |
| LOC110499563 | LOC106589940 | coding | downstream | 992768 | 42683879 ~ 42733292 (-) |
| LOC110499498 | LOC106578834 | coding | downstream | 1080801 | 42597760 ~ 42645259 (-) |
| LOC110499497 | NA | coding | downstream | 1137061 | 42587728 ~ 42588999 (-) |
| LOC118942076 | NA | coding | upstream | 79100 | 43805498 ~ 43807349 (-) |
| tbata | LOC106577277 | coding | upstream | 228285 | 43954683 ~ 43966333 (-) |
| LOC110499516 | LOC106578803 | coding | upstream | 263991 | 43990389 ~ 44016464 (-) |
| LOC110499513 | LOC106578802 | coding | upstream | 331049 | 44057447 ~ 44081042 (-) |
| LOC110499524 | LOC106589979 | coding | upstream | 1320356 | 45046754 ~ 45059248 (-) |
| G1697077 | NA | non-coding | downstream | 3545 | 43722035 ~ 43722515 (-) |
| G1697076 | NA | non-coding | downstream | 5195 | 43720521 ~ 43720865 (-) |
| G1697075 | LOC105030512 | non-coding | downstream | 9434 | 43716208 ~ 43716626 (-) |
| G1697074 | NA | non-coding | downstream | 10303 | 43715538 ~ 43715757 (-) |
| G1697061 | NA | non-coding | downstream | 59419 | 43666135 ~ 43666641 (-) |
| G1697089 | NA | non-coding | upstream | 12955 | 43739353 ~ 43739665 (-) |
| G1697092 | NA | non-coding | upstream | 18816 | 43745214 ~ 43745431 (-) |
| G1697098 | NA | non-coding | upstream | 32852 | 43759250 ~ 43759493 (-) |
| G1697105 | NA | non-coding | upstream | 59531 | 43785929 ~ 43788524 (-) |
| G1697106 | NA | non-coding | upstream | 65176 | 43791574 ~ 43791783 (-) |
| LOC110492809 | unc5b | other | downstream | 85969 | 43630001 ~ 43803224 (-) |
| G1697017 | NA | other | downstream | 224019 | 43501425 ~ 43502041 (-) |
| G1696714 | NA | other | downstream | 594362 | 43130200 ~ 43131698 (-) |
| G1696673 | NA | other | downstream | 676697 | 43047738 ~ 43049363 (-) |
| G1696606 | NA | other | downstream | 843268 | 42882169 ~ 42882792 (-) |
| G1697090 | NA | other | upstream | 14909 | 43741307 ~ 43741664 (-) |
| G1697091 | NA | other | upstream | 18397 | 43744795 ~ 43745102 (-) |
| G1697093 | NA | other | upstream | 20101 | 43746499 ~ 43747178 (-) |
| G1697647 | LOC106589972 | other | upstream | 810475 | 44490843 ~ 44551607 (-) |
| G1697847 | NA | other | upstream | 953044 | 44679442 ~ 44681205 (-) |
