G1696931


Basic Information

Item Value
gene id G1696931
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43729424 ~ 43729739 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941157
caattgcacgcttcctcaaaacttgagacacctgtggcattgtgttgtgtgacaaaacggcacatttttagagtggtcttttattgtccccagcacaaggtgcacctgtgtaaagatcatgctgtttaatcagcttcttgatatgccacacctgtcagggggatggattatcttgtcaaaagagaaatgctcactaacagggatgtaaacaaatgtgtgaacacaatttgagagaaaacaGCTTTTTgtccatatggaacatttcttgggATCtttgggaccaacattttacatgttgcgttcagtGTATTTATAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941157 True 316 lncRNA 0.40 1 43729424 43729739

Neighbor

gene id symbol gene type direction distance location
LOC110499505 LOC106589952 coding upstream 113726 43552789 ~ 43615700 (+)
LOC118942021 micu1 coding upstream 235243 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 326660 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 581055 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 607529 42950949 ~ 43125594 (+)
LOC110499517 LOC106589992 coding downstream 247541 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 294280 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 304749 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 361661 44091400 ~ 44134903 (+)
LOC110499567 LOC106589958 coding downstream 405270 44135009 ~ 44181809 (+)
G1696927 NA non-coding upstream 12705 43716427 ~ 43716719 (+)
G1696914 NA non-coding upstream 16760 43666102 ~ 43712664 (+)
G1696923 NA non-coding upstream 22791 43706263 ~ 43706633 (+)
G1696913 NA non-coding upstream 63746 43665444 ~ 43665678 (+)
G1696909 NA non-coding upstream 95681 43633309 ~ 43633743 (+)
G1696936 NA non-coding downstream 6578 43736317 ~ 43738691 (+)
G1696941 NA non-coding downstream 29638 43759377 ~ 43759690 (+)
G1696942 NA non-coding downstream 31114 43760853 ~ 43764322 (+)
G1696948 NA non-coding downstream 63418 43793157 ~ 43793370 (+)
G1696959 NA non-coding downstream 95158 43824897 ~ 43825120 (+)
G1696916 NA other upstream 59071 43669564 ~ 43670353 (+)
G1696905 NA other upstream 68069 43626388 ~ 43661355 (+)
G1696904 NA other upstream 103064 43623484 ~ 43626360 (+)
G1696563 NA other upstream 519906 43207559 ~ 43209518 (+)
G1697152 NA other downstream 137490 43867229 ~ 43908497 (+)
G1697222 NA other downstream 501583 44231322 ~ 44231767 (+)
G1697374 NA other downstream 768921 44498660 ~ 44499846 (+)
LOC110499568 LOC106589976 other downstream 1157328 44885773 ~ 44922697 (+)
G1698119 yo84 other downstream 1381827 45111566 ~ 45112361 (+)

Expression


Co-expression Network