G1696936


Basic Information

Item Value
gene id G1696936
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43736317 ~ 43738691 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941162
gtagacaggtagacatgtagacatgtacacaggtagacatgtacacaggtagacaggtagacatgtacacaggtagacatgtagagaggtagacaggtagacatgtacacaggtagacaggtagacatgtacacaggtagtcatttagacatgtagacatgtacacaggtagacatttagacaggtagacatgtacacaggtagacatgtagataTGTACACAGGTAGATatgtagacatgtacacaggtagatatgtagacatgtacacaggtagacatg

Function

NR:

description
hypothetical protein EH28_03297, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941162 True 281 lncRNA 0.42 3 43736317 43738691

Neighbor

gene id symbol gene type direction distance location
LOC110499505 LOC106589952 coding upstream 120619 43552789 ~ 43615700 (+)
LOC118942021 micu1 coding upstream 242136 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 333553 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 587948 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 614422 42950949 ~ 43125594 (+)
LOC110499517 LOC106589992 coding downstream 238589 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 285328 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 295797 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 352709 44091400 ~ 44134903 (+)
LOC110499567 LOC106589958 coding downstream 396318 44135009 ~ 44181809 (+)
G1696931 NA non-coding upstream 6578 43729424 ~ 43729739 (+)
G1696927 NA non-coding upstream 19598 43716427 ~ 43716719 (+)
G1696914 NA non-coding upstream 23653 43666102 ~ 43712664 (+)
G1696923 NA non-coding upstream 29684 43706263 ~ 43706633 (+)
G1696913 NA non-coding upstream 70639 43665444 ~ 43665678 (+)
G1696941 NA non-coding downstream 20686 43759377 ~ 43759690 (+)
G1696942 NA non-coding downstream 22162 43760853 ~ 43764322 (+)
G1696948 NA non-coding downstream 54466 43793157 ~ 43793370 (+)
G1696959 NA non-coding downstream 86206 43824897 ~ 43825120 (+)
G1696961 NA non-coding downstream 90976 43829667 ~ 43832484 (+)
G1696916 NA other upstream 65964 43669564 ~ 43670353 (+)
G1696905 NA other upstream 74962 43626388 ~ 43661355 (+)
G1696904 NA other upstream 109957 43623484 ~ 43626360 (+)
G1696563 NA other upstream 526799 43207559 ~ 43209518 (+)
G1697152 NA other downstream 128538 43867229 ~ 43908497 (+)
G1697222 NA other downstream 492631 44231322 ~ 44231767 (+)
G1697374 NA other downstream 759969 44498660 ~ 44499846 (+)
LOC110499568 LOC106589976 other downstream 1148376 44885773 ~ 44922697 (+)
G1698119 yo84 other downstream 1372875 45111566 ~ 45112361 (+)

Expression


Co-expression Network