G1696941


Basic Information

Item Value
gene id G1696941
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43759377 ~ 43759690 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941167
gaatcttgtttctcatgttctgcgagtcctttaggtgccttttggcaaactccaagcggactggcatgtgccttttactgaggagtggcctccgtctggccactctaccataaaggcctgattggtggagtgctgcagagatggttgttcttctggaaggtcctcccttctccacagaggaactctggagctctgtcagagtgaccatcaggttcttggtcgcctccctgaccaaaggctcttctccccccaattgctcagtttggccggacggccaggCCTAGGAAGAGTCTaagtggttccaaacctcttct

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941167 True 314 lncRNA 0.54 1 43759377 43759690

Neighbor

gene id symbol gene type direction distance location
LOC110499505 LOC106589952 coding upstream 143679 43552789 ~ 43615700 (+)
LOC118942021 micu1 coding upstream 265196 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 356613 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 611008 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 637482 42950949 ~ 43125594 (+)
LOC110499517 LOC106589992 coding downstream 217590 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 264329 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 274798 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 331710 44091400 ~ 44134903 (+)
LOC110499567 LOC106589958 coding downstream 375319 44135009 ~ 44181809 (+)
G1696936 NA non-coding upstream 20686 43736317 ~ 43738691 (+)
G1696931 NA non-coding upstream 29638 43729424 ~ 43729739 (+)
G1696927 NA non-coding upstream 42658 43716427 ~ 43716719 (+)
G1696914 NA non-coding upstream 46713 43666102 ~ 43712664 (+)
G1696923 NA non-coding upstream 52744 43706263 ~ 43706633 (+)
G1696942 NA non-coding downstream 1163 43760853 ~ 43764322 (+)
G1696948 NA non-coding downstream 33467 43793157 ~ 43793370 (+)
G1696959 NA non-coding downstream 65207 43824897 ~ 43825120 (+)
G1696961 NA non-coding downstream 69977 43829667 ~ 43832484 (+)
G1696964 NA non-coding downstream 81515 43841205 ~ 43841502 (+)
G1696916 NA other upstream 89024 43669564 ~ 43670353 (+)
G1696905 NA other upstream 98022 43626388 ~ 43661355 (+)
G1696904 NA other upstream 133017 43623484 ~ 43626360 (+)
G1696563 NA other upstream 549859 43207559 ~ 43209518 (+)
G1697152 NA other downstream 107539 43867229 ~ 43908497 (+)
G1697222 NA other downstream 471632 44231322 ~ 44231767 (+)
G1697374 NA other downstream 738970 44498660 ~ 44499846 (+)
LOC110499568 LOC106589976 other downstream 1127377 44885773 ~ 44922697 (+)
G1698119 yo84 other downstream 1351876 45111566 ~ 45112361 (+)

Expression


Co-expression Network