G1697152


Basic Information

Item Value
gene id G1697152
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 43867229 ~ 43908497 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941505
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctctactgtcattatattaccctggtctaccatctactgtcaatatattaccctggtattaccctggtctaccatctactctcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattataatacGCTGGTTTtgaatctactgtcattatattaccctagtctaccatctactgtcattatattaccctggtctaccatctgctgtcattatattaccctggtctaccctctactgtcattatattaccctggtctagaatatactgtcattacattaccctggtctaccatctgctttcatattaccctggtctaccatctactgtcattatgttatgctggtctaccctctactgtcattatattaccctggtctctactgtcattattttaccctggtctaccatctactgtcattatgttaccctggtctaccatctactgtcattatattaccctcgtctaccatctactgtcattatattaccctggtctaccatctaatgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccagctactgtcattattttaccctgctcTGCCATCTACTCTCTTTATATTACCCaggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatct
>TU1941506
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactttcattatattaccctggtctaccagctactgtcattattttaccctgctctcccatctactctcattatattaacc
>TU1941507
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctgctttcatattaccctggtctaccatctgctgtcattatattaccctggtctaccatctactgtcattatattaccctg
>TU1941508
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgTAATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatactACCCTGATCTACCATCTACTCTCATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactctaattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaaaatatactgtcattacattaccctggtctaacatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcatcatattaacctggtctaccatctactgtcatattattaccctggtctaccatctactgtcatcatattaccctggtctaccatctactgtcattatattaccctagtctaccatctactgtcattatattacactggtctaccatctactgtcattatattaccctggtctaccagctac
>TU1941509
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcATTAttttaccatctactgtcattatattaccctggtctaccctctactgtcattatattaccctggtctaccatctactgtccttATATTAccctctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactttcattatattaccctggtctatcatctactgtcattatattaccctggtctactatctactgtcattacattatcctggtctctatcatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcatattattaccctggtctaccatctactttcatattattaccctggtctcccatctactgtcattatattaccattttctaccatctactgtcattattttaccctgctctcccatctactctcattatattaacctggtctcccctctactgtcattatattaccctggtattaacctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccagctactgtcattattttaccctgctctcccatctactctcattatattaccctggtctcccctctactgtcattatattcccctggtctaccatctactgtcattatattaccctggtcaacCCTCCACTGTCCTTATATTACCAttttctaccatctactgtcattatattacccttgtCTACCATCTACTTTCATTATATTACcgtggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattacactggtctccc
>TU1941510
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctctactgtcattatattaccctggtctaccatctactgtcaatatattaccctggtattaccctggtctaccatctactctcattatattaccctggtctaccatctactgtcattatattac
>TU1941512
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctgctttcatattaccctggtctaccatctactgtcattatattaccctggtctctactgtcattatattatgctggtctaccctctactgtcattatattaccctggtctaccatctactgtcattatgttaccctcatataccatctactgtcattatattaccctggtctactatctactgtcattacattatcctggtctctatcatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcatattattaccctggtctaccatctactttcatattattaccctggtctcccatctactgtcattatattaccattttctaccatctactgtcattattttaccctgctctcccatctactctcattatattaacctggtctcccctctactgtcattatattaccctggtattaacctggtctaccctctactgtcattatattaccctggtctctactgtcattattttaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcattatattaccctggtctccca
>TU1941513
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgTAATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatactACCCTGATCTACCATCTACTCTCATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccttctactgtcattatattaccctggtctaccatctactgtcattatattac
>TU1941515
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgTAATTATtttaccctctactgtcattatattaccctggtctaccctctactgtcattatattaccctggtctaacctctactgtcattatattaccctggtctaccatctactgtcattaatttaccctggtattaccctggtctacaatctactgtcattatactACCCTGATCTACCATCTACTCTCATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactctcattatattacgctggtctaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcaataTTTTACCCTGCTCTCccatctactctcattatatt
>TU1941518
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattattttaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccagctactgtcattattttaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccagctactgtcattatttTacaatctactgtcattatattaccctggtctcccctctagtGTCATtaattaccctggtctaccatcaaCTGTTATTTATATTACCCTGGTCGTCAATCAACTG
>TU1941520
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgTAATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatactACCCTGATCTACCATCTACTCTCATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctcccatctactgtcattatattacccttgtctaccatctactgtcattatattaccctggtctatcatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctatcaTCTCatgtcattatattacactggtctatcatctactgtcattatattaccctggtctaccctctactgtcattatattaccctggtctaccatccactgtcaatatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctacctcctactctcattatattaccctggtctaccatctactgtcattatattaccctggtctaccacctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtttaccatctactgtcattatattaccctggtattaccctggtctatcatctactgtcattatattaccctggtctactatctactgtcattacattatcctggtctctatcatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcatattattaccctggtctaccatctactttcatattattaccctggtctcccatctactgtcattatattaccattttctaccatctactgtcattattttaccctgctctcccatctactctcattatattaacctggtctcccctctactgtcattatattaccctggtattaacctggtctaccctctactgtcattatattaccctggtctctactgtcattattttaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcattatattaccctggtctccca
>TU1941522
TCtcctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgTAATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatactACCCTGATCTACCATCTACTCTCATTATtttaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactctaattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaacatctactgtcattatattaccctggtctaccatctactgtcattattttaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcatattattaccctggtctaccatctactttcatattattaccctggtctcccatctactgtcattatattaccattttctaccatctactgtcattattttaccctgctctcccatctactctcattatattaacctggtctcccctctactgtcattatattaccctggtattaacctggtctaccctctactgtcattatattaccctggtctctactgtcattattttaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcattatattaccctggtctccca
>TU1941516
cattatattaccctggtctaccatctactgtcatcatattaacctggtctaccatctactgtcatattattaccctggtctaccctctactgtcattatattaccctggtctaccatctactgtcattatatttccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcagtatattaccctggtctaccatctactgtcattattctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaacctggtctaccatctactgtcattatattaccctggtctctatcatctactgtcattatattaccctggtctcccatttttctgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactttcatattattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcaataTTTTACCCTGCTCTCccatctactctcattatatt
>TU1941514
tattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctaatgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatgtactgtcattatattaccctggtctaccatctactgtcaatatattaccctgatattaccctggtctcccctctactgtcattattttaccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcaataTTTTACCCTGCTCTCccatctactctcattatatt
>TU1941517
atattacccttgtctaccatctactgtcattatattaccctggtctatcatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctatcaTCTCatgtcattatattacactggtctatcatctactgtcattatattaccctggtctaccctctactgtcattatattaccctggtctaccatccactgtcaatatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctacctcctactctcattatattaccctggtctaccatctactgtcattatattaccctggtctaccacctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactGTCATTATATTAccatggtctaccatctactgtcattatattaccctggtctaccatctactgtcatcatattaacctggtctacaatctactgtcatattattaccctggtctcccatctactttcatattattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattacgatggtctaccatctactgtcattatattaccctggtctaccatctactgtcatcatattaacctggtctaccatctactgtcatattattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattacgctggtctaccatctactgtcattatatt
>TU1941519
ccctctactgtcattatattaccctggtattaacctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctatcatctactgtcattatattaccctggtattaccctggtctaccagctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctcccatctactgtcattatattaccattttctaccatctactgtcattatattaccctggtctaccatctactttcatattattaccctggtctaccatctacagTCAATATATTAccatggtctaccatctactgtcattatattac

Function

NR:

description
talin-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941505 False 804 TUCP 0.39 4 43867229 43886750
TU1941506 False 353 lncRNA 0.40 3 43867229 43903679
TU1941507 False 175 lncRNA 0.41 3 43867229 43873726
TU1941508 False 658 lncRNA 0.38 6 43867229 43877219
TU1941509 False 997 lncRNA 0.39 4 43867229 43903149
TU1941510 False 206 lncRNA 0.39 5 43867229 43895575
TU1941512 False 810 TUCP 0.39 5 43867229 43904858
TU1941513 False 393 lncRNA 0.39 6 43867229 43888447
TU1941515 False 557 lncRNA 0.39 6 43867229 43906231
TU1941518 False 483 lncRNA 0.40 4 43867229 43908497
TU1941520 False 1431 TUCP 0.39 8 43867229 43904858
TU1941522 False 859 lncRNA 0.38 8 43867229 43904858
TU1941516 False 602 lncRNA 0.39 3 43879250 43906231
TU1941514 False 419 lncRNA 0.39 4 43882643 43906231
TU1941517 False 968 TUCP 0.39 3 43891211 43900052
TU1941519 True 447 lncRNA 0.38 3 43896652 43904091

Neighbor

gene id symbol gene type direction distance location
LOC110499505 LOC106589952 coding upstream 251531 43552789 ~ 43615700 (+)
LOC118942021 micu1 coding upstream 373048 43448714 ~ 43494181 (+)
LOC110510394 NA coding upstream 464465 43371693 ~ 43402764 (+)
LOC110499564 NA coding upstream 718860 43137388 ~ 43148369 (+)
LOC110499502 pde10a coding upstream 745334 42950949 ~ 43125594 (+)
LOC110499517 LOC106589992 coding downstream 68783 43977280 ~ 43987101 (+)
LOC110499607 NA coding downstream 115522 44024019 ~ 44028357 (+)
LOC110499515 LOC106589989 coding downstream 125991 44034488 ~ 44055611 (+)
capn2 LOC106589959 coding downstream 182903 44091400 ~ 44134903 (+)
LOC110499567 LOC106589958 coding downstream 226512 44135009 ~ 44181809 (+)
G1697149 NA non-coding upstream 3720 43862978 ~ 43863509 (+)
G1697139 NA non-coding upstream 11380 43855238 ~ 43855849 (+)
G1696964 NA non-coding upstream 25727 43841205 ~ 43841502 (+)
G1696961 NA non-coding upstream 34745 43829667 ~ 43832484 (+)
G1696959 NA non-coding upstream 42109 43824897 ~ 43825120 (+)
G1697166 NA non-coding downstream 503 43909000 ~ 43954471 (+)
G1697168 NA non-coding downstream 21400 43929897 ~ 43942030 (+)
G1697232 NA non-coding downstream 148961 44057458 ~ 44068769 (+)
G1697234 NA non-coding downstream 151566 44060063 ~ 44061339 (+)
G1697269 NA non-coding downstream 258422 44166919 ~ 44167354 (+)
G1696916 NA other upstream 196876 43669564 ~ 43670353 (+)
G1696905 NA other upstream 205874 43626388 ~ 43661355 (+)
G1696904 NA other upstream 240869 43623484 ~ 43626360 (+)
G1696563 NA other upstream 657711 43207559 ~ 43209518 (+)
G1697222 NA other downstream 322825 44231322 ~ 44231767 (+)
G1697374 NA other downstream 590163 44498660 ~ 44499846 (+)
LOC110499568 LOC106589976 other downstream 978570 44885773 ~ 44922697 (+)
G1698119 yo84 other downstream 1203069 45111566 ~ 45112361 (+)
G1698413 i2b2b other downstream 1787699 45696196 ~ 45697330 (+)

Expression


Co-expression Network