Gene
RNA
| Item | Value |
|---|---|
| gene id | G1697153 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048584.1 |
| NCBI id | CM023238.2 |
| chromosome length | 46616863 |
| location | 43877796 ~ 43885790 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1941523 | True | 260 | lncRNA | 0.39 | 2 | 43877796 | 43885790 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110499505 | LOC106589952 | coding | upstream | 262098 | 43552789 ~ 43615700 (+) |
| LOC118942021 | micu1 | coding | upstream | 383615 | 43448714 ~ 43494181 (+) |
| LOC110510394 | NA | coding | upstream | 475032 | 43371693 ~ 43402764 (+) |
| LOC110499564 | NA | coding | upstream | 729427 | 43137388 ~ 43148369 (+) |
| LOC110499502 | pde10a | coding | upstream | 755901 | 42950949 ~ 43125594 (+) |
| LOC110499517 | LOC106589992 | coding | downstream | 91490 | 43977280 ~ 43987101 (+) |
| LOC110499607 | NA | coding | downstream | 138229 | 44024019 ~ 44028357 (+) |
| LOC110499515 | LOC106589989 | coding | downstream | 148698 | 44034488 ~ 44055611 (+) |
| capn2 | LOC106589959 | coding | downstream | 205610 | 44091400 ~ 44134903 (+) |
| LOC110499567 | LOC106589958 | coding | downstream | 249219 | 44135009 ~ 44181809 (+) |
| G1697157 | NA | non-coding | upstream | 2201 | 43871212 ~ 43875595 (+) |
| G1697149 | NA | non-coding | upstream | 14287 | 43862978 ~ 43863509 (+) |
| G1697139 | NA | non-coding | upstream | 21947 | 43855238 ~ 43855849 (+) |
| G1696964 | NA | non-coding | upstream | 36294 | 43841205 ~ 43841502 (+) |
| G1696961 | NA | non-coding | upstream | 45312 | 43829667 ~ 43832484 (+) |
| G1697164 | NA | non-coding | downstream | 5515 | 43891305 ~ 43898515 (+) |
| G1697166 | NA | non-coding | downstream | 23210 | 43909000 ~ 43954471 (+) |
| G1697168 | NA | non-coding | downstream | 44107 | 43929897 ~ 43942030 (+) |
| G1697232 | NA | non-coding | downstream | 171668 | 44057458 ~ 44068769 (+) |
| G1697234 | NA | non-coding | downstream | 174273 | 44060063 ~ 44061339 (+) |
| G1696916 | NA | other | upstream | 207443 | 43669564 ~ 43670353 (+) |
| G1696905 | NA | other | upstream | 216441 | 43626388 ~ 43661355 (+) |
| G1696904 | NA | other | upstream | 251436 | 43623484 ~ 43626360 (+) |
| G1696563 | NA | other | upstream | 668278 | 43207559 ~ 43209518 (+) |
| G1697222 | NA | other | downstream | 345532 | 44231322 ~ 44231767 (+) |
| G1697374 | NA | other | downstream | 612870 | 44498660 ~ 44499846 (+) |
| LOC110499568 | LOC106589976 | other | downstream | 1001277 | 44885773 ~ 44922697 (+) |
| G1698119 | yo84 | other | downstream | 1225776 | 45111566 ~ 45112361 (+) |
| G1698413 | i2b2b | other | downstream | 1810406 | 45696196 ~ 45697330 (+) |
