G1697535


Basic Information

Item Value
gene id G1697535
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 44219905 ~ 44320908 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1942128
gtgtgtgtagtgtgtatgagtagtGTGTATAGTACCTACCAGCAGCATGGATAACCAGTCCcagtgtagctgtgtgtgtagtgtgtatgagtagtgtgtgtgtgtagtgtgtgtagtgtgtgtgtgtagtgtgtgtgtagtgtgtatgagtagtgtgtgtgtgtagtgtgtgtagtgtgtgtgtgtgtgtgtgtgtgtgtgtagtgtgtgtgtgtgtgtgtagtgtgtgtgttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttcataccaCCCACCAGATCGTCCTCTCTGTAGTGCAtcttggagGTGTGTCGTCTCATGCTGTACACGGTCAGCAACAGGTAGAGGAACGCAAAGGTGGTGTGGAGCCACAGCAGCATGTTACTGAGAGGGGGGGCAgaaacagacacacgcacacagacagttagacaggcacacagacaaacacacacagattaaaacacagttagtcagacagacagacaggcacacacagatTAAAACACAGTtagtcagacaggcaggcagacaggcagacatacagacagttagacaggtagtcagacagacaggcaggcaggcagaaagacagttagtcagacagacagtcaggc

Function

NR:

description
PREDICTED: CSC1-like protein 2 isoform X1

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1942128 True 615 lncRNA 0.49 3 44219905 44320908

Neighbor

gene id symbol gene type direction distance location
LOC110499513 LOC106578802 coding downstream 138863 44057447 ~ 44081042 (-)
LOC110499516 LOC106578803 coding downstream 203441 43990389 ~ 44016464 (-)
tbata LOC106577277 coding downstream 253572 43954683 ~ 43966333 (-)
LOC118942076 NA coding downstream 412556 43805498 ~ 43807349 (-)
LOC110492809 unc5b coding downstream 416681 43630001 ~ 43803224 (-)
LOC110499524 LOC106589979 coding upstream 725846 45046754 ~ 45059248 (-)
LOC110499570 NA coding upstream 770993 45091901 ~ 45097715 (-)
LOC110499526 LOC106578779 coding upstream 1152240 45473148 ~ 45496223 (-)
trnah-gug-109 NA coding upstream 1176131 45497039 ~ 45497110 (-)
LOC110499572 LOC106578653 coding upstream 1179234 45500142 ~ 45560428 (-)
G1697534 NA non-coding downstream 361 44218877 ~ 44219544 (-)
G1697489 NA non-coding downstream 38117 44179703 ~ 44181788 (-)
G1697494 NA non-coding downstream 64135 44155109 ~ 44155770 (-)
G1697420 NA non-coding downstream 85001 44133009 ~ 44134904 (-)
G1697466 NA non-coding downstream 136651 44082971 ~ 44083254 (-)
G1697575 NA non-coding upstream 1218 44322126 ~ 44322648 (-)
G1697576 NA non-coding upstream 4969 44325877 ~ 44327222 (-)
G1697583 NA non-coding upstream 19231 44340139 ~ 44343229 (-)
G1697586 NA non-coding upstream 25980 44346888 ~ 44347258 (-)
G1697595 NA non-coding upstream 51203 44372111 ~ 44372668 (-)
G1697093 NA other downstream 472727 43746499 ~ 43747178 (-)
G1697091 NA other downstream 474803 43744795 ~ 43745102 (-)
G1697090 NA other downstream 478241 43741307 ~ 43741664 (-)
G1697017 NA other downstream 717864 43501425 ~ 43502041 (-)
G1697647 LOC106589972 other upstream 215965 44490843 ~ 44551607 (-)
G1697847 NA other upstream 358534 44679442 ~ 44681205 (-)
G1697879 NA other upstream 438718 44759626 ~ 44760029 (-)
G1697887 NA other upstream 460506 44781414 ~ 44820534 (-)
G1697885 NA other upstream 460604 44781512 ~ 44836723 (-)

Expression

G1697535 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 2.
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G1697535 Expression in each Bioproject

Bar chart with 17 bars.
G1697535 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 20.
End of interactive chart.

Co-expression Network