G1697353


Basic Information

Item Value
gene id G1697353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 44438508 ~ 44442514 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1941845
GGTAGAATACGGTtgttgtgtatggtagaatacggttgttgtgtatggtagaatatggttgttgtgtagggtagaatacggtagttgtgtagggtagaatacggtagttgtgtagggtagaatacggttgttgtgtatggtagaatacggttgttgtgtatggtagaatatggttgttgtgtagggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatac
>TU1941841
gaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtatagggtagaatacggtagttgtgtagggtagaatacggtagttgtgtagggtagaatacggtagttgtgtagggtagaatacagtagttgtgtagggtagaatacggtagttgtgtatggtagaatatggctgttgtgtatggtagaatatggttgttgtgtagggtagaatacggtagttgtgtagggtagaatacggtagttgtgtagggtaggatacagtagttgtgtagggtagaatacggtagttgtgtatggtagaatTTGGTtgttgtgtatggtagaatatggttgttgtgtagggtagaatatggtagttgtgtatggtagaataaggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacagtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaatacggtagttgtgtatggtagaatatggttgttgtgtagggtagaatatggtagttgtgtatggtagaatatggtagttgtgtagggtagaatacggtagttgtgtagggtagaatacggtagttgtgtatggtagaataaGGTAGTTTTGtatggtag

Function

NR:

description
PREDICTED: uncharacterized protein LOC106533168

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1941845 False 355 lncRNA 0.41 2 44438508 44441645
TU1941841 True 1128 lncRNA 0.40 2 44439547 44442514

Neighbor

gene id symbol gene type direction distance location
LOC110499511 LOC106578785 coding upstream 76534 44337645 ~ 44361974 (+)
LOC110499510 LOC106589963 coding upstream 111259 44298168 ~ 44327249 (+)
LOC110499566 LOC105028001 coding upstream 175091 44181988 ~ 44263417 (+)
LOC110499567 LOC106589958 coding upstream 256699 44135009 ~ 44181809 (+)
capn2 LOC106589959 coding upstream 303605 44091400 ~ 44134903 (+)
LOC110499568 LOC106589976 coding downstream 443259 44885773 ~ 44922697 (+)
LOC110515455 jag1 coding downstream 882387 45324901 ~ 45444013 (+)
LOC118942022 NA coding downstream 1236411 45678925 ~ 45679902 (+)
LOC118942078 NA coding downstream 1580380 46022894 ~ 46025800 (+)
tsnax tsnax coding downstream 1715120 46157634 ~ 46174248 (+)
G1697335 NA non-coding upstream 30246 44407495 ~ 44408262 (+)
G1697341 NA non-coding upstream 43089 44393871 ~ 44395419 (+)
G1697327 NA non-coding upstream 65840 44372111 ~ 44372668 (+)
G1697325 NA non-coding upstream 74731 44362964 ~ 44363777 (+)
G1697324 NA non-coding upstream 76831 44359591 ~ 44361677 (+)
G1697365 NA non-coding downstream 34019 44476533 ~ 44477267 (+)
G1697376 NA non-coding downstream 64416 44506930 ~ 44507456 (+)
G1697675 NA non-coding downstream 130370 44572884 ~ 44573101 (+)
G1697680 NA non-coding downstream 136224 44578738 ~ 44578965 (+)
G1697682 NA non-coding downstream 137062 44579576 ~ 44579795 (+)
G1697222 NA other upstream 206741 44231322 ~ 44231767 (+)
G1697152 NA other upstream 533650 43867229 ~ 43908497 (+)
G1696916 NA other upstream 768155 43669564 ~ 43670353 (+)
G1696905 NA other upstream 777153 43626388 ~ 43661355 (+)
G1696904 NA other upstream 812148 43623484 ~ 43626360 (+)
G1697374 NA other downstream 56146 44498660 ~ 44499846 (+)
G1698119 yo84 other downstream 669052 45111566 ~ 45112361 (+)
G1698413 i2b2b other downstream 1253682 45696196 ~ 45697330 (+)
G1698414 NA other downstream 1257576 45700090 ~ 45701101 (+)

Expression


Co-expression Network