G1697680


Basic Information

Item Value
gene id G1697680
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 44578738 ~ 44578965 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1942330
GAACCTTGACCCATCTCCGTTGGTAACCAGTTAATAACAGCAATGAGGCACCTCGAGGGTTTGTGGTATTTGGCCAATGAATTACTTCAAAATCATACAATCtgatttttgttttatattccgtctctcacagttgaagtgtacctatgataaaaattacagacctctacatgctttgtaagtaggaaaacctgcaaatcggtagtatatcaaatacttgttctcccc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1942330 True 228 lncRNA 0.38 1 44578738 44578965

Neighbor

gene id symbol gene type direction distance location
LOC110499508 LOC106589972 coding upstream 41020 44402023 ~ 44537718 (+)
LOC110499511 LOC106578785 coding upstream 216764 44337645 ~ 44361974 (+)
LOC110499510 LOC106589963 coding upstream 251489 44298168 ~ 44327249 (+)
LOC110499566 LOC105028001 coding upstream 315321 44181988 ~ 44263417 (+)
LOC110499567 LOC106589958 coding upstream 396929 44135009 ~ 44181809 (+)
LOC110499568 LOC106589976 coding downstream 306808 44885773 ~ 44922697 (+)
LOC110515455 jag1 coding downstream 745936 45324901 ~ 45444013 (+)
LOC118942022 NA coding downstream 1099960 45678925 ~ 45679902 (+)
LOC118942078 NA coding downstream 1443929 46022894 ~ 46025800 (+)
tsnax tsnax coding downstream 1578669 46157634 ~ 46174248 (+)
G1697675 NA non-coding upstream 5637 44572884 ~ 44573101 (+)
G1697376 NA non-coding upstream 71282 44506930 ~ 44507456 (+)
G1697365 NA non-coding upstream 101471 44476533 ~ 44477267 (+)
G1697353 NA non-coding upstream 136224 44438508 ~ 44442514 (+)
G1697354 NA non-coding upstream 136704 44441699 ~ 44442034 (+)
G1697682 NA non-coding downstream 611 44579576 ~ 44579795 (+)
G1697685 NA non-coding downstream 1550 44580515 ~ 44580811 (+)
G1697747 NA non-coding downstream 74995 44653960 ~ 44654274 (+)
G1697761 NA non-coding downstream 90543 44669508 ~ 44669804 (+)
G1697766 NA non-coding downstream 95029 44673994 ~ 44674553 (+)
G1697374 NA other upstream 78892 44498660 ~ 44499846 (+)
G1697222 NA other upstream 346971 44231322 ~ 44231767 (+)
G1697152 NA other upstream 673880 43867229 ~ 43908497 (+)
G1696916 NA other upstream 908385 43669564 ~ 43670353 (+)
G1696905 NA other upstream 917383 43626388 ~ 43661355 (+)
G1698119 yo84 other downstream 532601 45111566 ~ 45112361 (+)
G1698413 i2b2b other downstream 1117231 45696196 ~ 45697330 (+)
G1698414 NA other downstream 1121125 45700090 ~ 45701101 (+)
G1698884 NA other downstream 1609980 46188945 ~ 46190421 (+)

Expression


Co-expression Network