G1697800


Basic Information

Item Value
gene id G1697800
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 44759626 ~ 44760117 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1942460
gtggtatagaggagacggacccactggttgccctctaggttacagagagctggtagtcccatccaccacactaccaggtgggtggtatagaggagacggacctactggttgccctctaggttacagagagctggtagtcccatccaccacactaccaggtgggtggtatagaggagatggacccactggttaccctctaggttacagagagctggtagtcccatccaccaaactaccaggtgtgaaaca
>TU1942461
gtggtatagaggagacggacccactggttgccctctaggttacagagagctggtagtcccatccaccacactaccaggtgggtggtatagaggagatggacccactggttgccctctaggttacagagagctggtagtcccatccaccacactaccaggtgggtggtatagaggagacggacctactggttgccctctaggttacagagagctggtagtcccatccaccacactaccaggtgggtggtatagaggagatggacccactggttaccctctaggttacagagagctggtagtcccatccaccaaactaccaggtgtgaaaca

Function

NR:

description
uncharacterized protein LOC110969240 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1942460 False 249 lncRNA 0.54 4 44759626 44760117
TU1942461 True 330 lncRNA 0.55 2 44759626 44760117

Neighbor

gene id symbol gene type direction distance location
LOC110499508 LOC106589972 coding upstream 221908 44402023 ~ 44537718 (+)
LOC110499511 LOC106578785 coding upstream 397652 44337645 ~ 44361974 (+)
LOC110499510 LOC106589963 coding upstream 432377 44298168 ~ 44327249 (+)
LOC110499566 LOC105028001 coding upstream 496209 44181988 ~ 44263417 (+)
LOC110499567 LOC106589958 coding upstream 577817 44135009 ~ 44181809 (+)
LOC110499568 LOC106589976 coding downstream 125656 44885773 ~ 44922697 (+)
LOC110515455 jag1 coding downstream 564784 45324901 ~ 45444013 (+)
LOC118942022 NA coding downstream 918808 45678925 ~ 45679902 (+)
LOC118942078 NA coding downstream 1262777 46022894 ~ 46025800 (+)
tsnax tsnax coding downstream 1397517 46157634 ~ 46174248 (+)
G1697790 NA non-coding upstream 27342 44731474 ~ 44732284 (+)
G1697789 NA non-coding upstream 32692 44726150 ~ 44726934 (+)
G1697766 NA non-coding upstream 85073 44673994 ~ 44674553 (+)
G1697761 NA non-coding upstream 89822 44669508 ~ 44669804 (+)
G1697747 NA non-coding upstream 105352 44653960 ~ 44654274 (+)
G1697808 NA non-coding downstream 20288 44780405 ~ 44836735 (+)
G1697813 NA non-coding downstream 51548 44811665 ~ 44814640 (+)
G1697814 NA non-coding downstream 51740 44811857 ~ 44814981 (+)
G1697819 NA non-coding downstream 79426 44839543 ~ 44880908 (+)
G1697821 NA non-coding downstream 102080 44862197 ~ 44865271 (+)
G1697374 NA other upstream 259780 44498660 ~ 44499846 (+)
G1697222 NA other upstream 527859 44231322 ~ 44231767 (+)
G1697152 NA other upstream 854768 43867229 ~ 43908497 (+)
G1696916 NA other upstream 1089273 43669564 ~ 43670353 (+)
G1696905 NA other upstream 1098271 43626388 ~ 43661355 (+)
G1698119 yo84 other downstream 351449 45111566 ~ 45112361 (+)
G1698413 i2b2b other downstream 936079 45696196 ~ 45697330 (+)
G1698414 NA other downstream 939973 45700090 ~ 45701101 (+)
G1698884 NA other downstream 1428828 46188945 ~ 46190421 (+)

Expression


Co-expression Network