G1697885


Basic Information

Item Value
gene id G1697885
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 44781512 ~ 44836723 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1942588
tttaccctctactgtcattatattaccctggtctaccctctactgtcattatattaccctggtctaccatccactgtcaatatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccttctactctcattatattaccctggtctaccatctactgtcattatattaccctgGTATTAccatggtctaccatctactgtcattatattaccctggtctaccatctactctcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcatcattttaccctggtctaccatctactgtcattatattaccctggtctaccagctactgtcattattttaccatGCTctcccatctactgtcattatattaccctggtctcccctctaccgtcattatattacactggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcatcatattaacctggtctaccatctactgtcatattattaccctggtctaacctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcatcatattaacctggtctaccatctactgtcata
>TU1942590
ACCATCTACtttcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccttctactctcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctattgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactttcattatattaccctggtctaccagctactgtcattattttaccctgctctcccatctactctcattatattaacctggtctcccctctactgtcattatattacactggtctctcctctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtctaccatctactttcattatattaccctggtctaccagctactgtcattattttaccctggtctcccctctactgtcattatattaccctggtctactatctactgtcattatattatcctggtattaccctggtctaccacctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtttaccatctactgtcattatattaccctggtattacccttgtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattacac
>TU1942592
catctactgtcattatattaccctggtcaacCCTCCACTGTCCTTATATTACCCTTTTCcaacatctactgtcattatattacccttgtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattacactggtctcccatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctatcaTCTCatgtcattatattacactggtctatcatctactgtcattattttaccctctactgtcattatattaccctggtctaccctctactgtcattatattaccctggtctaccatccactgtcaatatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctacctcctactctcattatattaccctggtctaccatctactgtcattatattaccctggtctaccacctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtattaccctggtctaccatctactgtcattatattaccctggtttaccatctactgtcattatattaccctggtctaccagctactgtcattatattaccctggtctactatctactgtcattatattaccctggtctcccctctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatattaccctggtctaccatctactgtcattatatta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1942588 False 796 TUCP 0.40 2 44781512 44835263
TU1942590 False 866 lncRNA 0.39 4 44828414 44835405
TU1942592 True 900 TUCP 0.39 3 44831110 44836723
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110499513 LOC106578802 coding downstream 747372 44057447 ~ 44081042 (-)
LOC110499516 LOC106578803 coding downstream 811950 43990389 ~ 44016464 (-)
tbata LOC106577277 coding downstream 862081 43954683 ~ 43966333 (-)
LOC118942076 NA coding downstream 1021065 43805498 ~ 43807349 (-)
LOC110492809 unc5b coding downstream 1025190 43630001 ~ 43803224 (-)
LOC110499524 LOC106589979 coding upstream 211349 45046754 ~ 45059248 (-)
LOC110499570 NA coding upstream 256496 45091901 ~ 45097715 (-)
LOC110499526 LOC106578779 coding upstream 637743 45473148 ~ 45496223 (-)
trnah-gug-109 NA coding upstream 661634 45497039 ~ 45497110 (-)
LOC110499572 LOC106578653 coding upstream 664737 45500142 ~ 45560428 (-)
G1697886 NA non-coding downstream 261 44825473 ~ 44828153 (-)
G1697892 NA non-coding downstream 1831 44824173 ~ 44826583 (-)
G1697889 NA non-coding downstream 36179 44787904 ~ 44792235 (-)
G1697867 NA non-coding downstream 97955 44730116 ~ 44730459 (-)
G1697866 NA non-coding downstream 101344 44726430 ~ 44727070 (-)
G1697895 NA non-coding upstream 2188 44837593 ~ 44884302 (-)
G1697898 NA non-coding upstream 7610 44843015 ~ 44859830 (-)
G1697896 NA non-coding upstream 8996 44844401 ~ 44867039 (-)
G1697909 NA non-coding upstream 57010 44892415 ~ 44893798 (-)
G1697910 NA non-coding upstream 58717 44894122 ~ 44894554 (-)
G1697887 NA other downstream 7880 44781414 ~ 44820534 (-)
G1697888 NA other downstream 17162 44783606 ~ 44811252 (-)
G1697879 NA other downstream 68385 44759626 ~ 44760029 (-)
G1697847 NA other downstream 147209 44679442 ~ 44681205 (-)
G1697647 LOC106589972 other downstream 289949 44490843 ~ 44551607 (-)
G1697911 NA other upstream 59713 44895118 ~ 44898551 (-)
G1697921 NA other upstream 84974 44920379 ~ 44922126 (-)
G1698163 NA other upstream 330301 45165706 ~ 45166383 (-)
G1698656 NA other upstream 826917 45662322 ~ 45663716 (-)
G1699034 NA other upstream 1226800 46062205 ~ 46062556 (-)
G1697749 NA non-coding downstream 124390 44656730 ~ 44657122 (-)
G1697738 NA non-coding downstream 138821 44642486 ~ 44642691 (-)
G1697736 NA non-coding downstream 142254 44638880 ~ 44639258 (-)
G1697093 NA other downstream 1034334 43746499 ~ 43747178 (-)
G1697091 NA other downstream 1036410 43744795 ~ 43745102 (-)

Expression

G1697885 Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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G1697885 Expression in each Bioproject

Bar chart with 3 bars.
G1697885 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
End of interactive chart.

Co-expression Network