G1698020


Basic Information

Item Value
gene id G1698020
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 45017552 ~ 45018072 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1942787
cgtgaatacagactcaagctcattaccataacgcaacgttaactattcatgaaaatcgcaaatgaaatgaaataaatatgctagctctcaagcttagccttttgttaacaacactgtcatctcagattctcaaaatatgcttctcaaccattgcaaaacaagcatttgtgtaacagtattgatggctaacgtagcatttagcattagcattcagctggcaacatttacacaaaaaaacagaaaagcattcaaaaaaatcatttacctttgaagaacttcagatgttttcaatgaggagactctcagatagcaaatgttcagtttttcctgaaagattatttgtttaggacaaatcgctctgttttctgcgtcacgtttagctatgaaaaaacccctgtatccaggattgtgtaaatctatcagcaagctcattagcataacacaacgttaactatttatgaaaatcgcaaatgaaatgaaataaatatgccatctctcaagcttagccttttgtaaacaac

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1942787 True 521 lncRNA 0.34 1 45017552 45018072

Neighbor

gene id symbol gene type direction distance location
LOC110499568 LOC106589976 coding upstream 94855 44885773 ~ 44922697 (+)
LOC110499508 LOC106589972 coding upstream 479834 44402023 ~ 44537718 (+)
LOC110499511 LOC106578785 coding upstream 655578 44337645 ~ 44361974 (+)
LOC110499510 LOC106589963 coding upstream 690303 44298168 ~ 44327249 (+)
LOC110499566 LOC105028001 coding upstream 754135 44181988 ~ 44263417 (+)
LOC110515455 jag1 coding downstream 306829 45324901 ~ 45444013 (+)
LOC118942022 NA coding downstream 660853 45678925 ~ 45679902 (+)
LOC118942078 NA coding downstream 1004822 46022894 ~ 46025800 (+)
tsnax tsnax coding downstream 1139562 46157634 ~ 46174248 (+)
disc1 LOC106595121 coding downstream 1160529 46178601 ~ 46308949 (+)
G1698017 NA non-coding upstream 803 45016504 ~ 45016749 (+)
G1698011 NA non-coding upstream 4399 45012787 ~ 45013153 (+)
G1698005 NA non-coding upstream 10971 45006376 ~ 45006581 (+)
G1698001 NA non-coding upstream 22654 44994482 ~ 44994898 (+)
G1697981 NA non-coding upstream 37009 44980288 ~ 44980543 (+)
G1698021 NA non-coding downstream 2387 45020459 ~ 45020710 (+)
G1698024 NA non-coding downstream 6802 45024874 ~ 45025218 (+)
G1698060 NA non-coding downstream 43021 45061093 ~ 45061354 (+)
G1698071 NA non-coding downstream 56104 45074176 ~ 45075994 (+)
G1698082 NA non-coding downstream 61718 45079790 ~ 45080157 (+)
G1697374 NA other upstream 517706 44498660 ~ 44499846 (+)
G1697222 NA other upstream 785785 44231322 ~ 44231767 (+)
G1697152 NA other upstream 1112694 43867229 ~ 43908497 (+)
G1696916 NA other upstream 1347199 43669564 ~ 43670353 (+)
G1698119 yo84 other downstream 93494 45111566 ~ 45112361 (+)
G1698413 i2b2b other downstream 678124 45696196 ~ 45697330 (+)
G1698414 NA other downstream 682018 45700090 ~ 45701101 (+)
G1698884 NA other downstream 1170873 46188945 ~ 46190421 (+)
LOC110499521 msmb other downstream 1528700 46546637 ~ 46552961 (+)

Expression


Co-expression Network