G1698060


Basic Information

Item Value
gene id G1698060
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048584.1
NCBI id CM023238.2
chromosome length 46616863
location 45061093 ~ 45061354 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1942831
gaaagttggagcaactttgacgtcatggcccccacccttcccaaccagttatgattctggggagactttctatctcttccgctagatgtcctctttcagtagagctttgaatcgttcaaatcccgcgagaattgaccctatgggagtgaaattagtgcgtgccacgagagaataggctgtgcgtaagggcgcgaattggtcccagccattcctttgttccagcactcaagagaagggcagacgatggccgattgaattgaag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1942831 True 262 lncRNA 0.50 1 45061093 45061354

Neighbor

gene id symbol gene type direction distance location
LOC110499568 LOC106589976 coding upstream 138396 44885773 ~ 44922697 (+)
LOC110499508 LOC106589972 coding upstream 523375 44402023 ~ 44537718 (+)
LOC110499511 LOC106578785 coding upstream 699119 44337645 ~ 44361974 (+)
LOC110499510 LOC106589963 coding upstream 733844 44298168 ~ 44327249 (+)
LOC110499566 LOC105028001 coding upstream 797676 44181988 ~ 44263417 (+)
LOC110515455 jag1 coding downstream 263547 45324901 ~ 45444013 (+)
LOC118942022 NA coding downstream 617571 45678925 ~ 45679902 (+)
LOC118942078 NA coding downstream 961540 46022894 ~ 46025800 (+)
tsnax tsnax coding downstream 1096280 46157634 ~ 46174248 (+)
disc1 LOC106595121 coding downstream 1117247 46178601 ~ 46308949 (+)
G1698024 NA non-coding upstream 35875 45024874 ~ 45025218 (+)
G1698021 NA non-coding upstream 40383 45020459 ~ 45020710 (+)
G1698020 NA non-coding upstream 43021 45017552 ~ 45018072 (+)
G1698017 NA non-coding upstream 44344 45016504 ~ 45016749 (+)
G1698011 NA non-coding upstream 47940 45012787 ~ 45013153 (+)
G1698071 NA non-coding downstream 12822 45074176 ~ 45075994 (+)
G1698082 NA non-coding downstream 18436 45079790 ~ 45080157 (+)
G1698091 NA non-coding downstream 23555 45084909 ~ 45086754 (+)
G1698092 NA non-coding downstream 25970 45087324 ~ 45087911 (+)
G1698099 NA non-coding downstream 34903 45096257 ~ 45096822 (+)
G1697374 NA other upstream 561247 44498660 ~ 44499846 (+)
G1697222 NA other upstream 829326 44231322 ~ 44231767 (+)
G1697152 NA other upstream 1156235 43867229 ~ 43908497 (+)
G1696916 NA other upstream 1390740 43669564 ~ 43670353 (+)
G1698119 yo84 other downstream 50212 45111566 ~ 45112361 (+)
G1698413 i2b2b other downstream 634842 45696196 ~ 45697330 (+)
G1698414 NA other downstream 638736 45700090 ~ 45701101 (+)
G1698884 NA other downstream 1127591 46188945 ~ 46190421 (+)
LOC110499521 msmb other downstream 1485418 46546637 ~ 46552961 (+)

Expression


Co-expression Network